RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 RBM5P52756 815 aaKnown RBP eCLIP18.5■□□□□ 0.55
SLC6A1-203ENST00000460480 CDAN1Q8IWY9 1227 aa18.5■□□□□ 0.55
SLC6A1-203ENST00000460480 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
SLC6A1-203ENST00000460480 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
SLC6A1-203ENST00000460480 SLC34A2O95436 690 aa18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 FGFR2P21802 821 aa18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 CRKP46108 304 aa18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 FBXO46Q6PJ61 603 aaPredicted RBP18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 PTPN18Q99952 460 aa18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 MKI67P46013 3256 aaKnown RBP18.49■□□□□ 0.55
SLC6A1-203ENST00000460480 LAMB1P07942 1786 aa18.48■□□□□ 0.55
SLC6A1-203ENST00000460480 IREB2P48200 963 aaKnown RBP18.48■□□□□ 0.55
SLC6A1-203ENST00000460480 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.48■□□□□ 0.55
SLC6A1-203ENST00000460480 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
SLC6A1-203ENST00000460480 IQSEC3Q9UPP2 1182 aaPredicted RBP18.48■□□□□ 0.55
SLC6A1-203ENST00000460480 BCAMP50895 628 aa18.47■□□□□ 0.55
SLC6A1-203ENST00000460480 TNFAIP1Q13829 316 aa18.47■□□□□ 0.55
SLC6A1-203ENST00000460480 METTL24Q5JXM2 366 aa18.47■□□□□ 0.55
SLC6A1-203ENST00000460480 MS4A4AQ96JQ5 239 aa18.47■□□□□ 0.55
SLC6A1-203ENST00000460480 ALDH1L2Q3SY69 923 aa18.46■□□□□ 0.55
SLC6A1-203ENST00000460480 CAVIN4Q5BKX8 364 aa18.46■□□□□ 0.55
SLC6A1-203ENST00000460480 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
SLC6A1-203ENST00000460480 TMEM39BQ9GZU3 492 aa18.46■□□□□ 0.55
SLC6A1-203ENST00000460480 KIF16BQ96L93 1317 aa18.46■□□□□ 0.55
SLC6A1-203ENST00000460480 TCP10L2B9ZVM9 353 aa18.45■□□□□ 0.54
SLC6A1-203ENST00000460480 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
SLC6A1-203ENST00000460480 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
SLC6A1-203ENST00000460480 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
SLC6A1-203ENST00000460480 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
SLC6A1-203ENST00000460480 CAP1Q01518 475 aa18.44■□□□□ 0.54
SLC6A1-203ENST00000460480 VPS37DQ86XT2 251 aa18.44■□□□□ 0.54
SLC6A1-203ENST00000460480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
SLC6A1-203ENST00000460480 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
SLC6A1-203ENST00000460480 EYA2O00167 538 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 MAP3K9P80192 1104 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 CHAF1AQ13111 956 aaPredicted RBP18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 CRHR2Q13324 411 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 FKBP1CQ5VVH2 108 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 OTOP1Q7RTM1 612 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 OPTNQ96CV9 577 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 ELP3Q9H9T3 547 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 SUGT1Q9Y2Z0 365 aa18.43■□□□□ 0.54
SLC6A1-203ENST00000460480 PUM3Q15397 648 aaKnown RBP18.42■□□□□ 0.54
SLC6A1-203ENST00000460480 FAM83AQ86UY5 434 aa18.42■□□□□ 0.54
SLC6A1-203ENST00000460480 TEKT1Q969V4 418 aa18.42■□□□□ 0.54
SLC6A1-203ENST00000460480 ARAP2Q8WZ64 1704 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 TNNI2P48788 182 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 CACNB3P54284 484 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 VGLL4Q14135 290 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 HHIPL2Q6UWX4 724 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 BRI3BPQ8WY22 251 aa18.41■□□□□ 0.54
SLC6A1-203ENST00000460480 FRAT2O75474 233 aaPredicted RBP18.4■□□□□ 0.54
SLC6A1-203ENST00000460480 IFIT1P09914 478 aaKnown RBP18.4■□□□□ 0.54
SLC6A1-203ENST00000460480 LPIN2Q92539 896 aa18.4■□□□□ 0.54
SLC6A1-203ENST00000460480 BRCA2P51587 3418 aa18.4■□□□□ 0.54
SLC6A1-203ENST00000460480 OTOFQ9HC10 1997 aa18.39■□□□□ 0.53
SLC6A1-203ENST00000460480 FBXO3Q9UK99 471 aa18.39■□□□□ 0.53
SLC6A1-203ENST00000460480 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
SLC6A1-203ENST00000460480 SPDYE5A6NIY4 337 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 ZBTB22O15209 634 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 CIAO1O76071 339 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 SP3Q02447 781 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 WDR66Q8TBY9 1149 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 CD99L2Q8TCZ2 262 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 ERO1AQ96HE7 468 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 SMC4Q9NTJ3 1288 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
SLC6A1-203ENST00000460480 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
SLC6A1-203ENST00000460480 GTF2A2P52657 109 aa18.37■□□□□ 0.53
SLC6A1-203ENST00000460480 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
SLC6A1-203ENST00000460480 MAST3O60307 1309 aa18.36■□□□□ 0.53
SLC6A1-203ENST00000460480 SLC5A1P13866 664 aa18.36■□□□□ 0.53
SLC6A1-203ENST00000460480 INTS3Q68E01 1043 aaKnown RBP18.36■□□□□ 0.53
SLC6A1-203ENST00000460480 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
SLC6A1-203ENST00000460480 ZKSCAN4Q969J2 545 aaPredicted RBP18.36■□□□□ 0.53
SLC6A1-203ENST00000460480 CCL15-CCL14A0A0B4J2E2 113 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 UBTFL1P0CB47 393 aaPredicted RBP18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 CCL15Q16663 113 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 ERO1BQ86YB8 467 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 FAM151AQ8WW52 585 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 EFCC1Q9HA90 598 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 ZNF112Q9UJU3 913 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 CSADQ9Y600 493 aa18.35■□□□□ 0.53
SLC6A1-203ENST00000460480 PRPF38BQ5VTL8 546 aaKnown RBP18.34■□□□□ 0.53
SLC6A1-203ENST00000460480 CDC42EP5Q6NZY7 148 aa18.34■□□□□ 0.53
SLC6A1-203ENST00000460480 ARMC5Q96C12 935 aa18.34■□□□□ 0.53
SLC6A1-203ENST00000460480 CEP126Q9P2H0 1117 aa18.34■□□□□ 0.53
SLC6A1-203ENST00000460480 DAGLAQ9Y4D2 1042 aa18.34■□□□□ 0.53
SLC6A1-203ENST00000460480 RPAP1Q9BWH6 1393 aaPredicted RBP18.33■□□□□ 0.53
SLC6A1-203ENST00000460480 KIAA0100Q14667 2235 aaKnown RBP18.33■□□□□ 0.53
SLC6A1-203ENST00000460480 SALL1Q9NSC2 1324 aa18.33■□□□□ 0.53
SLC6A1-203ENST00000460480 POTEFA5A3E0 1075 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms