RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 GMLQ99445 158 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
GARNL3-211ENST00000460176 ANTXR1Q9H6X2 564 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 PIH1D3Q9NQM4 214 aaKnown RBP12.48□□□□□ -0.41
GARNL3-211ENST00000460176 GJA3Q9Y6H8 435 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 MYO3BQ8WXR4 1341 aa12.47□□□□□ -0.41
GARNL3-211ENST00000460176 SCN4AP35499 1836 aa12.47□□□□□ -0.41
GARNL3-211ENST00000460176 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-211ENST00000460176 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-211ENST00000460176 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
GARNL3-211ENST00000460176 MYH2Q9UKX2 1941 aa12.47□□□□□ -0.41
GARNL3-211ENST00000460176 GLTPD2A6NH11 291 aa12.46□□□□□ -0.41
GARNL3-211ENST00000460176 GOLIM4O00461 696 aa12.46□□□□□ -0.41
GARNL3-211ENST00000460176 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-211ENST00000460176 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.41
GARNL3-211ENST00000460176 PRDX5P30044 214 aa12.46□□□□□ -0.41
GARNL3-211ENST00000460176 TTC22Q5TAA0 569 aa12.46□□□□□ -0.41
GARNL3-211ENST00000460176 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.41
GARNL3-211ENST00000460176 SUGT1Q9Y2Z0 365 aa12.46□□□□□ -0.41
GARNL3-211ENST00000460176 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.42
GARNL3-211ENST00000460176 GSPT1P15170 499 aaKnown RBP12.45□□□□□ -0.42
GARNL3-211ENST00000460176 RGS3P49796 1198 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 SCNN1DP51172 638 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
GARNL3-211ENST00000460176 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 DPF2Q92785 391 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
GARNL3-211ENST00000460176 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
GARNL3-211ENST00000460176 F8W031 263 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-211ENST00000460176 LDHBP07195 334 aaKnown RBP12.44□□□□□ -0.42
GARNL3-211ENST00000460176 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-211ENST00000460176 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-211ENST00000460176 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-211ENST00000460176 GPRC5DQ9NZD1 345 aa12.44□□□□□ -0.42
GARNL3-211ENST00000460176 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
GARNL3-211ENST00000460176 TTF2Q9UNY4 1162 aaKnown RBP12.44□□□□□ -0.42
GARNL3-211ENST00000460176 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
GARNL3-211ENST00000460176 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
GARNL3-211ENST00000460176 ZNF280AP59817 542 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-211ENST00000460176 MECOMQ03112 1051 aa12.43□□□□□ -0.42
GARNL3-211ENST00000460176 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
GARNL3-211ENST00000460176 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
GARNL3-211ENST00000460176 NSUN4Q96CB9 384 aaKnown RBP12.43□□□□□ -0.42
GARNL3-211ENST00000460176 MAST3O60307 1309 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 POTECB2RU33 542 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 IGSF3O75054 1194 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 GSE1Q14687 1217 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 DZIP1Q86YF9 867 aaKnown RBP12.42□□□□□ -0.42
GARNL3-211ENST00000460176 MICALL2Q8IY33 904 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 CNOT7Q9UIV1 285 aaKnown RBP12.42□□□□□ -0.42
GARNL3-211ENST00000460176 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 RFX7Q2KHR2 1363 aa12.42□□□□□ -0.42
GARNL3-211ENST00000460176 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 CHGBP05060 677 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 PDE6AP16499 860 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 SDSP20132 328 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 EPS15P42566 896 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 CRKP46108 304 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 MMP14P50281 582 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
GARNL3-211ENST00000460176 MAP3K12Q12852 859 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 MRIQ9BWK5 157 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 PCDHAC2Q9Y5I4 1007 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
GARNL3-211ENST00000460176 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 GAKO14976 1311 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 TCRBV5S4A2TA0A5A2 114 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 H7C1D1 291 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 EGFRP00533 1210 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-211ENST00000460176 ADD2P35612 726 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 SLC9C2Q5TAH2 1124 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 HHIPL2Q6UWX4 724 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-211ENST00000460176 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 OGFOD1Q8N543 542 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 TEKT1Q969V4 418 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 FSD1Q9BTV5 496 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.4□□□□□ -0.42
GARNL3-211ENST00000460176 MYOZ2Q9NPC6 264 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 HACL1Q9UJ83 578 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 DAGLAQ9Y4D2 1042 aa12.4□□□□□ -0.42
GARNL3-211ENST00000460176 ZNF532Q9HCE3 1301 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 CYP7A1P22680 504 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 GSTO1P78417 241 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms