RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 BEGAINQ9BUH8 593 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 GNL3LQ9NVN8 582 aaKnown RBP29.35■■■□□ 2.29
HOXB3-202ENST00000460160 ZNF70Q9UC06 446 aaPredicted RBP29.35■■■□□ 2.29
HOXB3-202ENST00000460160 SUGT1Q9Y2Z0 365 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 PPP2R3BQ9Y5P8 575 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 LBX1P52954 281 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 TIMM10P62072 90 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 TTLL12Q14166 644 aaPredicted RBP29.35■■■□□ 2.29
HOXB3-202ENST00000460160 WDR66Q8TBY9 1149 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 PANK1Q8TE04 598 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 TDRD3Q9H7E2 651 aaKnown RBP29.35■■■□□ 2.29
HOXB3-202ENST00000460160 C1orf115Q9H7X2 142 aa29.35■■■□□ 2.29
HOXB3-202ENST00000460160 SSC5DA1L4H1 1573 aa29.34■■■□□ 2.29
HOXB3-202ENST00000460160 POLA2Q14181 598 aa29.34■■■□□ 2.29
HOXB3-202ENST00000460160 RASAL3Q86YV0 1011 aa29.34■■■□□ 2.29
HOXB3-202ENST00000460160 PRDM10Q9NQV6 1147 aa29.34■■■□□ 2.29
HOXB3-202ENST00000460160 A0A1B0GUL7 405 aa29.33■■■□□ 2.29
HOXB3-202ENST00000460160 IFFO2Q5TF58 517 aa29.33■■■□□ 2.29
HOXB3-202ENST00000460160 CCDC102BQ68D86 513 aa29.33■■■□□ 2.29
HOXB3-202ENST00000460160 TEKT1Q969V4 418 aa29.33■■■□□ 2.29
HOXB3-202ENST00000460160 AKAP2Q9Y2D5 859 aa29.33■■■□□ 2.29
HOXB3-202ENST00000460160 SSH3Q8TE77 659 aa29.32■■■□□ 2.28
HOXB3-202ENST00000460160 MRIQ9BWK5 157 aa29.32■■■□□ 2.28
HOXB3-202ENST00000460160 MAST3O60307 1309 aa29.32■■■□□ 2.28
HOXB3-202ENST00000460160 SEMA3EO15041 775 aa29.31■■■□□ 2.28
HOXB3-202ENST00000460160 ZBTB22O15209 634 aa29.31■■■□□ 2.28
HOXB3-202ENST00000460160 ATP8B2P98198 1209 aa29.31■■■□□ 2.28
HOXB3-202ENST00000460160 KIF23Q02241 960 aaPredicted RBP29.31■■■□□ 2.28
HOXB3-202ENST00000460160 PRKG1Q13976 671 aa29.31■■■□□ 2.28
HOXB3-202ENST00000460160 RASA3Q14644 834 aa29.31■■■□□ 2.28
HOXB3-202ENST00000460160 G3BP1Q13283 466 aaKnown RBP eCLIP29.3■■■□□ 2.28
HOXB3-202ENST00000460160 XAGE2Q96GT9 111 aa29.3■■■□□ 2.28
HOXB3-202ENST00000460160 ZDHHC15Q96MV8 337 aa29.3■■■□□ 2.28
HOXB3-202ENST00000460160 FZD1Q9UP38 647 aa29.3■■■□□ 2.28
HOXB3-202ENST00000460160 ARMC9Q7Z3E5 817 aa29.3■■■□□ 2.28
HOXB3-202ENST00000460160 DENND2AQ9ULE3 1009 aa29.3■■■□□ 2.28
HOXB3-202ENST00000460160 AKAP11Q9UKA4 1901 aa29.29■■■□□ 2.28
HOXB3-202ENST00000460160 TNFAIP1Q13829 316 aa29.29■■■□□ 2.28
HOXB3-202ENST00000460160 NBPF12Q5TAG4 269 aaPredicted RBP29.29■■■□□ 2.28
HOXB3-202ENST00000460160 SALL1Q9NSC2 1324 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 CA12O43570 354 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 RASGRF1Q13972 1273 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 LDLRAD1Q5T700 205 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 APOBEC3HQ6NTF7 200 aaKnown RBP29.28■■■□□ 2.28
HOXB3-202ENST00000460160 HHIPL2Q6UWX4 724 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 TNS4Q8IZW8 715 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 TSKSQ9UJT2 592 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 RCAN3Q9UKA8 241 aa29.28■■■□□ 2.28
HOXB3-202ENST00000460160 ANGEL1Q9UNK9 670 aaKnown RBP29.28■■■□□ 2.28
HOXB3-202ENST00000460160 PRDX5P30044 214 aa29.27■■■□□ 2.28
HOXB3-202ENST00000460160 SUPT20HL1Q3ZLR7 823 aa29.27■■■□□ 2.28
HOXB3-202ENST00000460160 TCP10L2B9ZVM9 353 aa29.26■■■□□ 2.27
HOXB3-202ENST00000460160 MS4A1P11836 297 aa29.26■■■□□ 2.27
HOXB3-202ENST00000460160 MVPQ14764 893 aaKnown RBP29.26■■■□□ 2.27
HOXB3-202ENST00000460160 NEUROD6Q96NK8 337 aa29.26■■■□□ 2.27
HOXB3-202ENST00000460160 MAP3K11Q16584 847 aa29.25■■■□□ 2.27
HOXB3-202ENST00000460160 TEPSINQ96N21 525 aa29.25■■■□□ 2.27
HOXB3-202ENST00000460160 PDS5AQ29RF7 1337 aaKnown RBP29.25■■■□□ 2.27
HOXB3-202ENST00000460160 PPP1R12BO60237 982 aaPredicted RBP29.25■■■□□ 2.27
HOXB3-202ENST00000460160 CACNB3P54284 484 aa29.25■■■□□ 2.27
HOXB3-202ENST00000460160 CDAN1Q8IWY9 1227 aa29.25■■■□□ 2.27
HOXB3-202ENST00000460160 CSRNP1Q96S65 589 aa29.25■■■□□ 2.27
HOXB3-202ENST00000460160 MYH2Q9UKX2 1941 aa29.24■■■□□ 2.27
HOXB3-202ENST00000460160 LDHBP07195 334 aaKnown RBP29.24■■■□□ 2.27
HOXB3-202ENST00000460160 DIXDC1Q155Q3 683 aa29.24■■■□□ 2.27
HOXB3-202ENST00000460160 TMEM39BQ9GZU3 492 aa29.24■■■□□ 2.27
HOXB3-202ENST00000460160 CASP8AP2Q9UKL3 1982 aa29.23■■■□□ 2.27
HOXB3-202ENST00000460160 CEP85Q6P2H3 762 aa29.23■■■□□ 2.27
HOXB3-202ENST00000460160 DAGLAQ9Y4D2 1042 aa29.23■■■□□ 2.27
HOXB3-202ENST00000460160 SURF6O75683 361 aaKnown RBP29.22■■■□□ 2.27
HOXB3-202ENST00000460160 TNNI2P48788 182 aa29.22■■■□□ 2.27
HOXB3-202ENST00000460160 NOP58Q9Y2X3 529 aaKnown RBP29.22■■■□□ 2.27
HOXB3-202ENST00000460160 OTOFQ9HC10 1997 aa29.22■■■□□ 2.27
HOXB3-202ENST00000460160 OS9Q13438 667 aaPredicted RBP29.21■■■□□ 2.27
HOXB3-202ENST00000460160 FKBP1CQ5VVH2 108 aa29.2■■■□□ 2.27
HOXB3-202ENST00000460160 ZGPATQ8N5A5 531 aaKnown RBP29.2■■■□□ 2.27
HOXB3-202ENST00000460160 GPR108Q9NPR9 543 aa29.2■■■□□ 2.27
HOXB3-202ENST00000460160 TMOD2Q9NZR1 351 aa29.2■■■□□ 2.27
HOXB3-202ENST00000460160 USP2O75604 605 aaPredicted RBP29.2■■■□□ 2.26
HOXB3-202ENST00000460160 GORABQ5T7V8 394 aa29.2■■■□□ 2.26
HOXB3-202ENST00000460160 REM2Q8IYK8 340 aaPredicted RBP29.2■■■□□ 2.26
HOXB3-202ENST00000460160 CLMNQ96JQ2 1002 aa29.2■■■□□ 2.26
HOXB3-202ENST00000460160 COG6Q9Y2V7 657 aa29.2■■■□□ 2.26
HOXB3-202ENST00000460160 TNNI3KQ59H18 835 aa29.19■■■□□ 2.26
HOXB3-202ENST00000460160 RNF186Q9NXI6 227 aa29.19■■■□□ 2.26
HOXB3-202ENST00000460160 SAGE1Q9NXZ1 904 aa29.19■■■□□ 2.26
HOXB3-202ENST00000460160 FPGT-TNNI3KV9GXZ4 949 aa29.19■■■□□ 2.26
HOXB3-202ENST00000460160 ARID4AP29374 1257 aaPredicted RBP29.18■■■□□ 2.26
HOXB3-202ENST00000460160 IREB2P48200 963 aaKnown RBP29.18■■■□□ 2.26
HOXB3-202ENST00000460160 MKRN3Q13064 507 aaKnown RBP29.18■■■□□ 2.26
HOXB3-202ENST00000460160 PI16Q6UXB8 463 aa29.18■■■□□ 2.26
HOXB3-202ENST00000460160 FAM83AQ86UY5 434 aa29.18■■■□□ 2.26
HOXB3-202ENST00000460160 HMG20BQ9P0W2 317 aa29.18■■■□□ 2.26
HOXB3-202ENST00000460160 ABCF2Q9UG63 623 aa29.18■■■□□ 2.26
HOXB3-202ENST00000460160 UNCXA6NJT0 531 aa29.17■■■□□ 2.26
HOXB3-202ENST00000460160 CDC42EP5Q6NZY7 148 aa29.17■■■□□ 2.26
HOXB3-202ENST00000460160 DDX19BQ9UMR2 479 aa29.17■■■□□ 2.26
HOXB3-202ENST00000460160 SPRYD7Q5W111 196 aa29.16■■■□□ 2.26
HOXB3-202ENST00000460160 SPATA5Q8NB90 893 aa29.16■■■□□ 2.26
HOXB3-202ENST00000460160 SLC10A4Q96EP9 437 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms