RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.73
CKAP2-204ENST00000459902 SELPP16109 830 aa10.51□□□□□ -0.73
CKAP2-204ENST00000459902 PPP2R3AQ06190 1150 aa10.51□□□□□ -0.73
CKAP2-204ENST00000459902 IGF2-ASQ6U949 168 aa10.51□□□□□ -0.73
CKAP2-204ENST00000459902 SV2BQ7L1I2 683 aa10.51□□□□□ -0.73
CKAP2-204ENST00000459902 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
CKAP2-204ENST00000459902 DCAF11Q8TEB1 546 aa10.51□□□□□ -0.73
CKAP2-204ENST00000459902 NRSN2Q9GZP1 204 aa10.51□□□□□ -0.73
CKAP2-204ENST00000459902 PAGE1O75459 146 aa10.5□□□□□ -0.73
CKAP2-204ENST00000459902 CELA3AP09093 270 aa10.5□□□□□ -0.73
CKAP2-204ENST00000459902 CCDC85BQ15834 202 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-204ENST00000459902 ALYREFQ86V81 257 aaKnown RBP10.5□□□□□ -0.73
CKAP2-204ENST00000459902 GSK3AP49840 483 aa10.49□□□□□ -0.73
CKAP2-204ENST00000459902 KCNMA1Q12791 1236 aa10.49□□□□□ -0.73
CKAP2-204ENST00000459902 STK35Q8TDR2 534 aa10.49□□□□□ -0.73
CKAP2-204ENST00000459902 EIF4EBP3O60516 100 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-204ENST00000459902 WISP1O95388 367 aa10.48□□□□□ -0.73
CKAP2-204ENST00000459902 CYP11A1P05108 521 aa10.48□□□□□ -0.73
CKAP2-204ENST00000459902 LENG1Q96BZ8 264 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-204ENST00000459902 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
CKAP2-204ENST00000459902 NOC4LQ9BVI4 516 aaKnown RBP10.48□□□□□ -0.73
CKAP2-204ENST00000459902 KRBA1A5PL33 1030 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 E9PSI1 815 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 ECEL1O95672 775 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 BMP6P22004 513 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 NME2P22392 152 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 MAOBP27338 520 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 POU4F3Q15319 338 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 DUOXA2Q1HG44 320 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 UBASH3BQ8TF42 649 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 USP26Q9BXU7 913 aa10.47□□□□□ -0.73
CKAP2-204ENST00000459902 LOC100289279A0A1B0GTE1 492 aa10.46□□□□□ -0.73
CKAP2-204ENST00000459902 APBA3O96018 575 aa10.46□□□□□ -0.73
CKAP2-204ENST00000459902 CTSBP07858 339 aa10.46□□□□□ -0.73
CKAP2-204ENST00000459902 ARNTP27540 789 aa10.46□□□□□ -0.73
CKAP2-204ENST00000459902 RASSF7Q02833 373 aa10.46□□□□□ -0.73
CKAP2-204ENST00000459902 SULF2Q8IWU5 870 aa10.46□□□□□ -0.73
CKAP2-204ENST00000459902 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.73
CKAP2-204ENST00000459902 DLGAP3O95886 979 aa10.45□□□□□ -0.74
CKAP2-204ENST00000459902 CORO1BQ9BR76 489 aa10.45□□□□□ -0.74
CKAP2-204ENST00000459902 C9orf172C9J069 976 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 GSTP1P09211 210 aaKnown RBP10.44□□□□□ -0.74
CKAP2-204ENST00000459902 FANCCQ00597 558 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 RASIP1Q5U651 963 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 PCNX4Q63HM2 1172 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 KIAA1211Q6ZU35 1233 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 ACAD11Q709F0 780 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 PDZD3Q86UT5 571 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 TMEM130Q8N3G9 435 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 NACC1Q96RE7 527 aa10.44□□□□□ -0.74
CKAP2-204ENST00000459902 ZC3H12CQ9C0D7 883 aaKnown RBP10.44□□□□□ -0.74
CKAP2-204ENST00000459902 SCAMP3O14828 347 aaKnown RBP10.43□□□□□ -0.74
CKAP2-204ENST00000459902 TTBK2Q6IQ55 1244 aa10.43□□□□□ -0.74
CKAP2-204ENST00000459902 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.43□□□□□ -0.74
CKAP2-204ENST00000459902 GRIN3AQ8TCU5 1115 aa10.43□□□□□ -0.74
CKAP2-204ENST00000459902 USP21Q9UK80 565 aa10.43□□□□□ -0.74
CKAP2-204ENST00000459902 SAMM50Q9Y512 469 aa10.43□□□□□ -0.74
CKAP2-204ENST00000459902 F8W735 103 aaPredicted RBP10.42□□□□□ -0.74
CKAP2-204ENST00000459902 ALX3O95076 343 aa10.42□□□□□ -0.74
CKAP2-204ENST00000459902 ZNF76P36508 570 aa10.42□□□□□ -0.74
CKAP2-204ENST00000459902 ZNF252P-AS1Q0IIN9 211 aa10.42□□□□□ -0.74
CKAP2-204ENST00000459902 EMILIN2Q9BXX0 1053 aa10.42□□□□□ -0.74
CKAP2-204ENST00000459902 CBX8Q9HC52 389 aa10.42□□□□□ -0.74
CKAP2-204ENST00000459902 METTL5Q9NRN9 209 aaKnown RBP10.42□□□□□ -0.74
CKAP2-204ENST00000459902 RLBP1P12271 317 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 CHRNA4P43681 627 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 LIG3P49916 1009 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 NRG1Q02297 640 aaPredicted RBP10.41□□□□□ -0.74
CKAP2-204ENST00000459902 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 CD163Q86VB7 1156 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 AGGF1Q8N302 714 aaeCLIP10.41□□□□□ -0.74
CKAP2-204ENST00000459902 RSRP1Q9BUV0 290 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 RUSC1Q9BVN2 902 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 GGT7Q9UJ14 662 aa10.41□□□□□ -0.74
CKAP2-204ENST00000459902 MEGF11A6BM72 1044 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 C1QTNF9BB2RNN3 333 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 F6X3S4 739 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 ADGRE1Q14246 886 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 EXOSC6Q5RKV6 272 aaKnown RBP10.4□□□□□ -0.74
CKAP2-204ENST00000459902 MAP1SQ66K74 1059 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-204ENST00000459902 HS2ST1Q7LGA3 356 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 ERMP1Q7Z2K6 904 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 KCNB2Q92953 911 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 RNF34Q969K3 372 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 CCDC86Q9H6F5 360 aaKnown RBP10.4□□□□□ -0.74
CKAP2-204ENST00000459902 AKTIPQ9H8T0 292 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 COPRSQ9NQ92 184 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 CYP8B1Q9UNU6 501 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 TLR6Q9Y2C9 796 aa10.4□□□□□ -0.74
CKAP2-204ENST00000459902 GDF11O95390 407 aa10.39□□□□□ -0.75
CKAP2-204ENST00000459902 RPS26P62854 115 aaKnown RBP10.39□□□□□ -0.75
CKAP2-204ENST00000459902 MBTPS1Q14703 1052 aa10.39□□□□□ -0.75
CKAP2-204ENST00000459902 LLGL2Q6P1M3 1020 aa10.39□□□□□ -0.75
CKAP2-204ENST00000459902 AGMOQ6ZNB7 445 aa10.39□□□□□ -0.75
CKAP2-204ENST00000459902 WFDC12Q8WWY7 111 aa10.39□□□□□ -0.75
CKAP2-204ENST00000459902 WDR89Q96FK6 387 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-204ENST00000459902 TMPRSS13Q9BYE2 586 aa10.39□□□□□ -0.75
CKAP2-204ENST00000459902 LIG1P18858 919 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms