RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SPDYE2Q495Y8 402 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 TEKT1Q969V4 418 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 MRIQ9BWK5 157 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 AOX1Q06278 1338 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 ZBTB7BO15156 539 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-203ENST00000459756 ZBTB22O15209 634 aa19.96■□□□□ 0.79
COL7A1-203ENST00000459756 MS4A1P11836 297 aa19.96■□□□□ 0.79
COL7A1-203ENST00000459756 TFCP2Q12800 502 aa19.96■□□□□ 0.79
COL7A1-203ENST00000459756 TNFAIP1Q13829 316 aa19.96■□□□□ 0.79
COL7A1-203ENST00000459756 MOB2Q70IA6 237 aa19.96■□□□□ 0.79
COL7A1-203ENST00000459756 ZNF70Q9UC06 446 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-203ENST00000459756 UBE2Q2LH0YL09 131 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 HSPA8P11142 646 aaKnown RBP19.95■□□□□ 0.78
COL7A1-203ENST00000459756 ADORA1P30542 326 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 LBX1P52954 281 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 TIMM10P62072 90 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 G3BP1Q13283 466 aaKnown RBP eCLIP19.95■□□□□ 0.78
COL7A1-203ENST00000459756 SUPT20HL1Q3ZLR7 823 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 IFFO2Q5TF58 517 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 ARMC9Q7Z3E5 817 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 TDRD3Q9H7E2 651 aaKnown RBP19.95■□□□□ 0.78
COL7A1-203ENST00000459756 DENND2AQ9ULE3 1009 aa19.95■□□□□ 0.78
COL7A1-203ENST00000459756 A0A1B0GUL7 405 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 PHKA1P46020 1223 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 POLA2Q14181 598 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 RASA3Q14644 834 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 CCDC102BQ68D86 513 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 RASAL3Q86YV0 1011 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 SSH3Q8TE77 659 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 ZDHHC15Q96MV8 337 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 ZIC5Q96T25 663 aa19.94■□□□□ 0.78
COL7A1-203ENST00000459756 KIF23Q02241 960 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-203ENST00000459756 MVPQ14764 893 aaKnown RBP19.93■□□□□ 0.78
COL7A1-203ENST00000459756 HHIPL2Q6UWX4 724 aa19.93■□□□□ 0.78
COL7A1-203ENST00000459756 REM2Q8IYK8 340 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-203ENST00000459756 PANK1Q8TE04 598 aa19.93■□□□□ 0.78
COL7A1-203ENST00000459756 TNS4Q8IZW8 715 aa19.92■□□□□ 0.78
COL7A1-203ENST00000459756 XAGE2Q96GT9 111 aa19.92■□□□□ 0.78
COL7A1-203ENST00000459756 C1orf115Q9H7X2 142 aa19.92■□□□□ 0.78
COL7A1-203ENST00000459756 RCAN3Q9UKA8 241 aa19.92■□□□□ 0.78
COL7A1-203ENST00000459756 PDS5AQ29RF7 1337 aaKnown RBP19.92■□□□□ 0.78
COL7A1-203ENST00000459756 SALL1Q9NSC2 1324 aa19.92■□□□□ 0.78
COL7A1-203ENST00000459756 PPP1R12BO60237 982 aaPredicted RBP19.91■□□□□ 0.78
COL7A1-203ENST00000459756 TNNI2P48788 182 aa19.91■□□□□ 0.78
COL7A1-203ENST00000459756 PRKG1Q13976 671 aa19.91■□□□□ 0.78
COL7A1-203ENST00000459756 LDLRAD1Q5T700 205 aa19.91■□□□□ 0.78
COL7A1-203ENST00000459756 ZGPATQ8N5A5 531 aaKnown RBP19.91■□□□□ 0.78
COL7A1-203ENST00000459756 NEUROD6Q96NK8 337 aa19.91■□□□□ 0.78
COL7A1-203ENST00000459756 ANGEL1Q9UNK9 670 aaKnown RBP19.91■□□□□ 0.78
COL7A1-203ENST00000459756 SSC5DA1L4H1 1573 aa19.91■□□□□ 0.78
COL7A1-203ENST00000459756 LDHBP07195 334 aaKnown RBP19.9■□□□□ 0.78
COL7A1-203ENST00000459756 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
COL7A1-203ENST00000459756 NBPF12Q5TAG4 269 aaPredicted RBP19.9■□□□□ 0.78
COL7A1-203ENST00000459756 APOBEC3HQ6NTF7 200 aaKnown RBP19.9■□□□□ 0.78
COL7A1-203ENST00000459756 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
COL7A1-203ENST00000459756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
COL7A1-203ENST00000459756 UNCXA6NJT0 531 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 TCP10L2B9ZVM9 353 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 PRDX5P30044 214 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 OS9Q13438 667 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-203ENST00000459756 RASGRF1Q13972 1273 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 GORABQ5T7V8 394 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 FKBP1CQ5VVH2 108 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
COL7A1-203ENST00000459756 SURF6O75683 361 aaKnown RBP19.88■□□□□ 0.77
COL7A1-203ENST00000459756 GPR108Q9NPR9 543 aa19.88■□□□□ 0.77
COL7A1-203ENST00000459756 SAGE1Q9NXZ1 904 aa19.88■□□□□ 0.77
COL7A1-203ENST00000459756 TSKSQ9UJT2 592 aa19.88■□□□□ 0.77
COL7A1-203ENST00000459756 NOP58Q9Y2X3 529 aaKnown RBP19.88■□□□□ 0.77
COL7A1-203ENST00000459756 AKAP11Q9UKA4 1901 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 IREB2P48200 963 aaKnown RBP19.87■□□□□ 0.77
COL7A1-203ENST00000459756 CEP85Q6P2H3 762 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 FAM83AQ86UY5 434 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
COL7A1-203ENST00000459756 TEPSINQ96N21 525 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 TMEM39BQ9GZU3 492 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 FZD1Q9UP38 647 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 DAGLAQ9Y4D2 1042 aa19.87■□□□□ 0.77
COL7A1-203ENST00000459756 DIXDC1Q155Q3 683 aa19.86■□□□□ 0.77
COL7A1-203ENST00000459756 SPTY2D1Q68D10 685 aaPredicted RBP19.86■□□□□ 0.77
COL7A1-203ENST00000459756 SLC10A4Q96EP9 437 aa19.86■□□□□ 0.77
COL7A1-203ENST00000459756 DDX19BQ9UMR2 479 aa19.86■□□□□ 0.77
COL7A1-203ENST00000459756 USP2O75604 605 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-203ENST00000459756 ARID4AP29374 1257 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-203ENST00000459756 CACNB3P54284 484 aa19.85■□□□□ 0.77
COL7A1-203ENST00000459756 RNF186Q9NXI6 227 aa19.85■□□□□ 0.77
COL7A1-203ENST00000459756 UQCRFS1P1P0C7P4 283 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 TNNI3KQ59H18 835 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 SPRYD7Q5W111 196 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 DZIP1Q86YF9 867 aaKnown RBP19.84■□□□□ 0.77
COL7A1-203ENST00000459756 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 ANKRD13AQ8IZ07 590 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 SPATA5Q8NB90 893 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 CHMP4BQ9H444 224 aaKnown RBP19.84■□□□□ 0.77
COL7A1-203ENST00000459756 HMG20BQ9P0W2 317 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 ABCF2Q9UG63 623 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 FPGT-TNNI3KV9GXZ4 949 aa19.84■□□□□ 0.77
COL7A1-203ENST00000459756 TRPA1O75762 1119 aa19.83■□□□□ 0.77
COL7A1-203ENST00000459756 CDC42EP5Q6NZY7 148 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms