RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RGL2O15211 777 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 CCP110O43303 1012 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 PPP6R2O75170 966 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 ZAP70P43403 619 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 KCNJ6P48051 423 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 NT5C2P49902 561 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 CCT2P78371 535 aaKnown RBP10.28□□□□□ -0.76
HDAC3-202ENST00000459727 MAP3K12Q12852 859 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 SART3Q15020 963 aaKnown RBP10.28□□□□□ -0.76
HDAC3-202ENST00000459727 PPP2R5BQ15173 497 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 ELOA2Q8IYF1 753 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-202ENST00000459727 TMTC2Q8N394 836 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 LINC00301Q8NCQ3 95 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 ENGASEQ8NFI3 743 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 TTLL11Q8NHH1 800 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 USP28Q96RU2 1077 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 SDF4Q9BRK5 362 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 NACAP1Q9BZK3 213 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 KRT23Q9C075 422 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 STRN4Q9NRL3 753 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 CICQ96RK0 1608 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-202ENST00000459727 IRS4O14654 1257 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-202ENST00000459727 SPTLC2O15270 562 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 CMA1P23946 247 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 LIFRP42702 1097 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 METAP2P50579 478 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC3-202ENST00000459727 SNW1Q13573 536 aaKnown RBP10.27□□□□□ -0.77
HDAC3-202ENST00000459727 IQCB1Q15051 598 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 SGMS1Q86VZ5 419 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 FMR1NBQ8N0W7 255 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC150Q8NCX0 1101 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 PIGBQ92521 554 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 PUS3Q9BZE2 481 aaKnown RBP10.27□□□□□ -0.77
HDAC3-202ENST00000459727 RNF41Q9H4P4 317 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-202ENST00000459727 KCND1Q9NSA2 647 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 TIAM2Q8IVF5 1701 aa10.27□□□□□ -0.77
HDAC3-202ENST00000459727 SH2B2O14492 632 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 IGSF3O75054 1194 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 PCP11498 1178 aaKnown RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 PTGS1P23219 599 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 ADORA1P30542 326 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 GNL2Q13823 731 aaKnown RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 SLC9C2Q5TAH2 1124 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 ANO1Q5XXA6 986 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 VGLL2Q8N8G2 317 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 SPC24Q8NBT2 197 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 FAM89AQ96GI7 184 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 KCNF1Q9H3M0 494 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 TRMT112Q9UI30 125 aaKnown RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC9Q9Y3X0 531 aaKnown RBP10.26□□□□□ -0.77
HDAC3-202ENST00000459727 MYH7P12883 1935 aa10.26□□□□□ -0.77
HDAC3-202ENST00000459727 FAM237AA0A1B0GTK4 181 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 IKBKBO14920 756 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 ZBTB43O43298 467 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 CBFA2T2O43439 604 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 FDPSP14324 419 aaKnown RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 MCAMP43121 646 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 PIP4K2BP78356 416 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 KIF23Q02241 960 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 SLC39A14Q15043 492 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 CDC5LQ99459 802 aaKnown RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 ALG1Q9BT22 464 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 NCOA5Q9HCD5 579 aaKnown RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 PCDHA7Q9UN72 937 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 THRAP3Q9Y2W1 955 aaKnown RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF330Q9Y3S2 320 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 MORC2Q9Y6X9 1032 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 PNPLA7Q6ZV29 1317 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-202ENST00000459727 MYH3P11055 1940 aa10.25□□□□□ -0.77
HDAC3-202ENST00000459727 ERICH2A1L162 156 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC69A6NI79 296 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 PATL2C9JE40 543 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 EXOC5O00471 708 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 FOXP2O15409 715 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 AP5Z1O43299 807 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 CUTAO60888 179 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 IDH1O75874 414 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 APPP05067 770 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 PDE6AP16499 860 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 FGFR2P21802 821 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 IARSP41252 1262 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 ANTXR2P58335 489 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 NLRP12P59046 1061 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms