RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 HMG20BQ9P0W2 317 aa12.47□□□□□ -0.41
PCCA-208ENST00000458283 ABT1Q9ULW3 272 aaKnown RBP12.47□□□□□ -0.41
PCCA-208ENST00000458283 COL4A5P29400 1685 aa12.47□□□□□ -0.41
PCCA-208ENST00000458283 CDC45O75419 566 aa12.46□□□□□ -0.41
PCCA-208ENST00000458283 CTCFP49711 727 aaPredicted RBP12.46□□□□□ -0.41
PCCA-208ENST00000458283 WASHC4Q2M389 1173 aa12.46□□□□□ -0.41
PCCA-208ENST00000458283 FBXO33Q7Z6M2 555 aa12.46□□□□□ -0.41
PCCA-208ENST00000458283 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
PCCA-208ENST00000458283 SPATA5Q8NB90 893 aa12.46□□□□□ -0.41
PCCA-208ENST00000458283 ZC3H12CQ9C0D7 883 aaKnown RBP12.46□□□□□ -0.41
PCCA-208ENST00000458283 PIH1D3Q9NQM4 214 aaKnown RBP12.46□□□□□ -0.41
PCCA-208ENST00000458283 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.42
PCCA-208ENST00000458283 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
PCCA-208ENST00000458283 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
PCCA-208ENST00000458283 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
PCCA-208ENST00000458283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCCA-208ENST00000458283 DIAPH3Q9NSV4 1193 aa12.45□□□□□ -0.42
PCCA-208ENST00000458283 MAST2Q6P0Q8 1798 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 ECE2O60344 883 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
PCCA-208ENST00000458283 CHGBP05060 677 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 DEFB115Q30KQ5 88 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
PCCA-208ENST00000458283 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
PCCA-208ENST00000458283 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 CD209Q9NNX6 404 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 ABCF2Q9UG63 623 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 DENND2AQ9ULE3 1009 aa12.44□□□□□ -0.42
PCCA-208ENST00000458283 MYO5AQ9Y4I1 1855 aaKnown RBP12.43□□□□□ -0.42
PCCA-208ENST00000458283 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
PCCA-208ENST00000458283 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
PCCA-208ENST00000458283 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
PCCA-208ENST00000458283 COA1Q9GZY4 146 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 DOCK2Q92608 1830 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 MYH7P12883 1935 aa12.43□□□□□ -0.42
PCCA-208ENST00000458283 THSD7BQ9C0I4 1608 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 SEMA3EO15041 775 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 EPS15P42566 896 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 SCNN1DP51172 638 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
PCCA-208ENST00000458283 KIAA2012Q0VF49 1180 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
PCCA-208ENST00000458283 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
PCCA-208ENST00000458283 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
PCCA-208ENST00000458283 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
PCCA-208ENST00000458283 CHMLP26374 656 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 LBX1P52954 281 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 GTF2IP78347 998 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
PCCA-208ENST00000458283 GRM1Q13255 1194 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 TTF1Q15361 905 aaPredicted RBP12.41□□□□□ -0.42
PCCA-208ENST00000458283 USP50Q70EL3 339 aaPredicted RBP12.41□□□□□ -0.42
PCCA-208ENST00000458283 FAM227BQ96M60 508 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 SCN9AQ15858 1988 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 RFX7Q2KHR2 1363 aa12.41□□□□□ -0.42
PCCA-208ENST00000458283 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
PCCA-208ENST00000458283 IL1R1P14778 569 aa12.4□□□□□ -0.42
PCCA-208ENST00000458283 PRDX5P30044 214 aa12.4□□□□□ -0.42
PCCA-208ENST00000458283 CWC27Q6UX04 472 aaKnown RBP12.4□□□□□ -0.42
PCCA-208ENST00000458283 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
PCCA-208ENST00000458283 BEGAINQ9BUH8 593 aa12.4□□□□□ -0.42
PCCA-208ENST00000458283 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCCA-208ENST00000458283 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
PCCA-208ENST00000458283 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 F8W031 263 aaPredicted RBP12.39□□□□□ -0.43
PCCA-208ENST00000458283 RAD17O75943 681 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 PDE6AP16499 860 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 ECE1P42892 770 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 GRIK5Q16478 980 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 DZIP1Q86YF9 867 aaKnown RBP12.39□□□□□ -0.43
PCCA-208ENST00000458283 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 IL25Q9H293 177 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
PCCA-208ENST00000458283 GPRC5DQ9NZD1 345 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
PCCA-208ENST00000458283 ZNF646O15015 1829 aaPredicted RBP12.39□□□□□ -0.43
PCCA-208ENST00000458283 PDS5AQ29RF7 1337 aaKnown RBP12.38□□□□□ -0.43
PCCA-208ENST00000458283 YDJCA8MPS7 323 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 TRAF5O00463 557 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 RNF113AO15541 343 aaKnown RBP12.38□□□□□ -0.43
PCCA-208ENST00000458283 MAP3K12Q12852 859 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
PCCA-208ENST00000458283 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
PCCA-208ENST00000458283 MAST3O60307 1309 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms