RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ZNF532Q9HCE3 1301 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 H0YIN7 160 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
RIF1-208ENST00000457745 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 PRDX5P30044 214 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 HIBADHP31937 336 aaKnown RBP10.54□□□□□ -0.72
RIF1-208ENST00000457745 ADCK5Q3MIX3 580 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 STOX1Q6ZVD7 989 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 NLGN2Q8NFZ4 835 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 KCNB2Q92953 911 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 CDK5RAP2Q96SN8 1893 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 EPB41L4AQ9HCS5 686 aaPredicted RBP10.54□□□□□ -0.72
RIF1-208ENST00000457745 GGA1Q9UJY5 639 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
RIF1-208ENST00000457745 PRKAB2O43741 272 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 C21orf2O43822 256 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 REC8O95072 547 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 PRELPP51888 382 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 DYNLL1P63167 89 aaKnown RBP10.53□□□□□ -0.72
RIF1-208ENST00000457745 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 WASHC4Q2M389 1173 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 SLC9C2Q5TAH2 1124 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 LCORLQ8N3X6 602 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 CERS5Q8N5B7 392 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 MAGEB6Q8N7X4 407 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 APPBP2Q92624 585 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 MAP4K1Q92918 833 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 IL17RAQ96F46 866 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 NBPF3Q9H094 633 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 CD209Q9NNX6 404 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 DENND2AQ9ULE3 1009 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 FER1L6Q2WGJ9 1857 aa10.53□□□□□ -0.72
RIF1-208ENST00000457745 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 SLC27A2O14975 620 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 MPNDQ8N594 471 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 MIGA1Q8NAN2 632 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 IPO9Q96P70 1041 aaKnown RBP10.52□□□□□ -0.73
RIF1-208ENST00000457745 UPF3BQ9BZI7 483 aaKnown RBP10.52□□□□□ -0.73
RIF1-208ENST00000457745 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 HELLSQ9NRZ9 838 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 CCDC88AQ3V6T2 1871 aa10.52□□□□□ -0.73
RIF1-208ENST00000457745 BAZ2AQ9UIF9 1905 aaKnown RBP10.52□□□□□ -0.73
RIF1-208ENST00000457745 PSME4Q14997 1843 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 MYH2Q9UKX2 1941 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 HIP1O00291 1037 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 GPAA1O43292 621 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 DTNBO60941 627 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 MBD4O95243 580 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 HSPD1P10809 573 aaKnown RBP10.51□□□□□ -0.73
RIF1-208ENST00000457745 IL1R1P14778 569 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 ALDH1B1P30837 517 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
RIF1-208ENST00000457745 MECOMQ03112 1051 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 CAVIN4Q5BKX8 364 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 CREB3L3Q68CJ9 461 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
RIF1-208ENST00000457745 RPAP1Q9BWH6 1393 aaPredicted RBP10.51□□□□□ -0.73
RIF1-208ENST00000457745 DDX60LQ5H9U9 1706 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 YDJCA8MPS7 323 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 ECM2O94769 699 aaPredicted RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 CYP21A2P08686 494 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 CYP7A1P22680 504 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 UBE3CQ15386 1083 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 AOC3Q16853 763 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 DPP8Q6V1X1 898 aaPredicted RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 RUFY2Q8WXA3 655 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 CNKSR1Q969H4 720 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 NSUN4Q96CB9 384 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 RIOK1Q9BRS2 568 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 UPF2Q9HAU5 1272 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 RAI14Q9P0K7 980 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 PCDHAC2Q9Y5I4 1007 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 PDS5AQ29RF7 1337 aaKnown RBP10.5□□□□□ -0.73
RIF1-208ENST00000457745 TIAM2Q8IVF5 1701 aa10.5□□□□□ -0.73
RIF1-208ENST00000457745 SEMA3EO15041 775 aa10.49□□□□□ -0.73
RIF1-208ENST00000457745 TTF1Q15361 905 aaPredicted RBP10.49□□□□□ -0.73
RIF1-208ENST00000457745 ZNF804AQ7Z570 1209 aa10.49□□□□□ -0.73
RIF1-208ENST00000457745 VPS37DQ86XT2 251 aa10.49□□□□□ -0.73
RIF1-208ENST00000457745 TTC14Q96N46 770 aa10.49□□□□□ -0.73
RIF1-208ENST00000457745 INCENPQ9NQS7 918 aa10.49□□□□□ -0.73
RIF1-208ENST00000457745 LAMB1P07942 1786 aa10.48□□□□□ -0.73
RIF1-208ENST00000457745 GSG1L2A8MUP6 293 aa10.48□□□□□ -0.73
RIF1-208ENST00000457745 NFKBIEO00221 500 aa10.48□□□□□ -0.73
RIF1-208ENST00000457745 LARGE1O95461 756 aa10.48□□□□□ -0.73
RIF1-208ENST00000457745 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
RIF1-208ENST00000457745 HAND2P61296 217 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms