RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 PRDX5P30044 214 aa22.21■■□□□ 1.15
TRIM13-206ENST00000457662 RBM5P52756 815 aaKnown RBP eCLIP22.21■■□□□ 1.15
TRIM13-206ENST00000457662 GPATCH3Q96I76 525 aa22.21■■□□□ 1.15
TRIM13-206ENST00000457662 ZBED3Q96IU2 234 aaPredicted RBP22.21■■□□□ 1.15
TRIM13-206ENST00000457662 ATP5JP18859 108 aa22.2■■□□□ 1.14
TRIM13-206ENST00000457662 ZAP70P43403 619 aa22.2■■□□□ 1.14
TRIM13-206ENST00000457662 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
TRIM13-206ENST00000457662 TEKT1Q969V4 418 aa22.2■■□□□ 1.14
TRIM13-206ENST00000457662 IGSF3O75054 1194 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 CYP2E1P05181 493 aaPredicted RBP22.19■■□□□ 1.14
TRIM13-206ENST00000457662 CRKP46108 304 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 NBPF9Q3BBW0 867 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 MAP1SQ66K74 1059 aaPredicted RBP22.19■■□□□ 1.14
TRIM13-206ENST00000457662 HHIPL2Q6UWX4 724 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 TBC1D9Q6ZT07 1266 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 CNTROBQ8N137 903 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 DCPSQ96C86 337 aaKnown RBP22.19■■□□□ 1.14
TRIM13-206ENST00000457662 ECHDC1Q9NTX5 307 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 LRP2BPQ9P2M1 347 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 AKAP11Q9UKA4 1901 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 ADAMTSL1Q8N6G6 1762 aa22.19■■□□□ 1.14
TRIM13-206ENST00000457662 SPDYE2BA6NHP3 402 aa22.18■■□□□ 1.14
TRIM13-206ENST00000457662 SPDYE6P0CI01 402 aa22.18■■□□□ 1.14
TRIM13-206ENST00000457662 B4GALNT3Q6L9W6 998 aa22.18■■□□□ 1.14
TRIM13-206ENST00000457662 SLF2Q8IX21 1173 aa22.18■■□□□ 1.14
TRIM13-206ENST00000457662 MYO1BO43795 1136 aa22.17■■□□□ 1.14
TRIM13-206ENST00000457662 C1QTNF8P60827 252 aa22.17■■□□□ 1.14
TRIM13-206ENST00000457662 DZIP1Q86YF9 867 aaKnown RBP22.17■■□□□ 1.14
TRIM13-206ENST00000457662 PRMT6Q96LA8 375 aaPredicted RBP22.17■■□□□ 1.14
TRIM13-206ENST00000457662 ZDHHC15Q96MV8 337 aa22.17■■□□□ 1.14
TRIM13-206ENST00000457662 NUCB1Q02818 461 aa22.16■■□□□ 1.14
TRIM13-206ENST00000457662 ANGEL2Q5VTE6 544 aaKnown RBP22.16■■□□□ 1.14
TRIM13-206ENST00000457662 CDC37L1Q7L3B6 337 aa22.16■■□□□ 1.14
TRIM13-206ENST00000457662 BOLA2Q9H3K6 86 aa22.16■■□□□ 1.14
TRIM13-206ENST00000457662 GGA3Q9NZ52 723 aa22.16■■□□□ 1.14
TRIM13-206ENST00000457662 RAI14Q9P0K7 980 aa22.16■■□□□ 1.14
TRIM13-206ENST00000457662 PITPNM2Q9BZ72 1349 aa22.16■■□□□ 1.14
TRIM13-206ENST00000457662 ITGBL1O95965 494 aaPredicted RBP22.15■■□□□ 1.14
TRIM13-206ENST00000457662 TTF1Q15361 905 aaPredicted RBP22.15■■□□□ 1.14
TRIM13-206ENST00000457662 CHD1LQ86WJ1 897 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 PCDHAC2Q9Y5I4 1007 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 ASTN2O75129 1339 aaPredicted RBP22.15■■□□□ 1.14
TRIM13-206ENST00000457662 TTC41PQ6P2S7 1318 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 LDHCP07864 332 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 GSTO1P78417 241 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 MECOMQ03112 1051 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 DIXDC1Q155Q3 683 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 FAM163AQ96GL9 167 aaPredicted RBP22.15■■□□□ 1.14
TRIM13-206ENST00000457662 HAUS7Q99871 368 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 LNPKQ9C0E8 428 aa22.15■■□□□ 1.14
TRIM13-206ENST00000457662 ERC2O15083 957 aa22.14■■□□□ 1.13
TRIM13-206ENST00000457662 KRT26Q7Z3Y9 468 aa22.14■■□□□ 1.13
TRIM13-206ENST00000457662 SULF1Q8IWU6 871 aa22.14■■□□□ 1.13
TRIM13-206ENST00000457662 NSUN4Q96CB9 384 aaKnown RBP22.14■■□□□ 1.13
TRIM13-206ENST00000457662 DNAJC2Q99543 621 aaKnown RBP22.14■■□□□ 1.13
TRIM13-206ENST00000457662 PIH1D3Q9NQM4 214 aaKnown RBP22.14■■□□□ 1.13
TRIM13-206ENST00000457662 NDUFB9Q9Y6M9 179 aa22.14■■□□□ 1.13
TRIM13-206ENST00000457662 MX1P20591 662 aa22.13■■□□□ 1.13
TRIM13-206ENST00000457662 APOBEC3HQ6NTF7 200 aaKnown RBP22.13■■□□□ 1.13
TRIM13-206ENST00000457662 OTUD7AQ8TE49 926 aaPredicted RBP22.13■■□□□ 1.13
TRIM13-206ENST00000457662 DAGLAQ9Y4D2 1042 aa22.13■■□□□ 1.13
TRIM13-206ENST00000457662 POLR2AP24928 1970 aaKnown RBP22.12■■□□□ 1.13
TRIM13-206ENST00000457662 ERICH6BQ5W0A0 696 aa22.12■■□□□ 1.13
TRIM13-206ENST00000457662 TMED8Q6PL24 325 aaPredicted RBP22.12■■□□□ 1.13
TRIM13-206ENST00000457662 USP48Q86UV5 1035 aa22.12■■□□□ 1.13
TRIM13-206ENST00000457662 APOBEC3FQ8IUX4 373 aaKnown RBP22.12■■□□□ 1.13
TRIM13-206ENST00000457662 GLIS2Q9BZE0 524 aaPredicted RBP22.12■■□□□ 1.13
TRIM13-206ENST00000457662 ANTXR1Q9H6X2 564 aa22.12■■□□□ 1.13
TRIM13-206ENST00000457662 TDRD3Q9H7E2 651 aaKnown RBP22.12■■□□□ 1.13
TRIM13-206ENST00000457662 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
TRIM13-206ENST00000457662 GOLIM4O00461 696 aa22.11■■□□□ 1.13
TRIM13-206ENST00000457662 IDH1O75874 414 aaKnown RBP22.11■■□□□ 1.13
TRIM13-206ENST00000457662 GLRX3O76003 335 aaKnown RBP22.11■■□□□ 1.13
TRIM13-206ENST00000457662 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
TRIM13-206ENST00000457662 ZNF70Q9UC06 446 aaPredicted RBP22.11■■□□□ 1.13
TRIM13-206ENST00000457662 STAP2Q9UGK3 403 aa22.11■■□□□ 1.13
TRIM13-206ENST00000457662 GAKO14976 1311 aa22.11■■□□□ 1.13
TRIM13-206ENST00000457662 SALL3Q9BXA9 1300 aa22.11■■□□□ 1.13
TRIM13-206ENST00000457662 CLRN2A0PK11 232 aa22.1■■□□□ 1.13
TRIM13-206ENST00000457662 SPDYE2Q495Y8 402 aa22.1■■□□□ 1.13
TRIM13-206ENST00000457662 NAA16Q6N069 864 aaPredicted RBP22.1■■□□□ 1.13
TRIM13-206ENST00000457662 ZNF384Q8TF68 577 aa22.1■■□□□ 1.13
TRIM13-206ENST00000457662 PDE1AP54750 535 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 TSHZ3Q63HK5 1081 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 MROH7-TTC4A0A0A0MT08 1334 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 PASKQ96RG2 1323 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 MYH2Q9UKX2 1941 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 PI4K2BQ8TCG2 481 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 VEZTQ9HBM0 779 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 TMOD2Q9NZR1 351 aa22.09■■□□□ 1.13
TRIM13-206ENST00000457662 AOX1Q06278 1338 aa22.08■■□□□ 1.13
TRIM13-206ENST00000457662 GPR75-ASB3A0A0A6YYF3 556 aa22.08■■□□□ 1.12
TRIM13-206ENST00000457662 TNFAIP1Q13829 316 aa22.08■■□□□ 1.12
TRIM13-206ENST00000457662 EDC3Q96F86 508 aaKnown RBP22.08■■□□□ 1.12
TRIM13-206ENST00000457662 CCDC136Q96JN2 1154 aa22.08■■□□□ 1.12
TRIM13-206ENST00000457662 ADM5C9JUS6 153 aa22.07■■□□□ 1.12
TRIM13-206ENST00000457662 TRAF5O00463 557 aa22.07■■□□□ 1.12
TRIM13-206ENST00000457662 FKBP1CQ5VVH2 108 aa22.07■■□□□ 1.12
TRIM13-206ENST00000457662 CDC42EP5Q6NZY7 148 aa22.07■■□□□ 1.12
TRIM13-206ENST00000457662 CENPQQ7L2Z9 268 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms