RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 FRAT2O75474 233 aaPredicted RBP27.21■■□□□ 1.95
SEC22C-213ENST00000456222 USP2O75604 605 aaPredicted RBP27.21■■□□□ 1.95
SEC22C-213ENST00000456222 SUPT20HL1Q3ZLR7 823 aa27.21■■□□□ 1.95
SEC22C-213ENST00000456222 SLC10A4Q96EP9 437 aa27.21■■□□□ 1.95
SEC22C-213ENST00000456222 MEIS3Q99687 375 aa27.21■■□□□ 1.95
SEC22C-213ENST00000456222 API5Q9BZZ5 524 aaKnown RBP27.21■■□□□ 1.95
SEC22C-213ENST00000456222 LRRFIP2Q9Y608 721 aaKnown RBP27.21■■□□□ 1.95
SEC22C-213ENST00000456222 TNRC18O15417 2968 aaPredicted RBP27.2■■□□□ 1.95
SEC22C-213ENST00000456222 TCP10L2B9ZVM9 353 aa27.2■■□□□ 1.94
SEC22C-213ENST00000456222 WNK4Q96J92 1243 aa27.2■■□□□ 1.94
SEC22C-213ENST00000456222 KIF16BQ96L93 1317 aa27.19■■□□□ 1.94
SEC22C-213ENST00000456222 HTTP42858 3142 aa27.19■■□□□ 1.94
SEC22C-213ENST00000456222 IFIT1P09914 478 aaKnown RBP27.19■■□□□ 1.94
SEC22C-213ENST00000456222 GJA5P36382 358 aa27.19■■□□□ 1.94
SEC22C-213ENST00000456222 CACNB3P54284 484 aa27.19■■□□□ 1.94
SEC22C-213ENST00000456222 ZNF296Q8WUU4 475 aaPredicted RBP27.19■■□□□ 1.94
SEC22C-213ENST00000456222 TMEM39BQ9GZU3 492 aa27.19■■□□□ 1.94
SEC22C-213ENST00000456222 PA2G4Q9UQ80 394 aaKnown RBP27.19■■□□□ 1.94
SEC22C-213ENST00000456222 SREBF2Q12772 1141 aa27.18■■□□□ 1.94
SEC22C-213ENST00000456222 TBC1D22AQ8WUA7 517 aa27.18■■□□□ 1.94
SEC22C-213ENST00000456222 TNNQ9UQP3 1299 aa27.18■■□□□ 1.94
SEC22C-213ENST00000456222 CTU1Q7Z7A3 348 aaKnown RBP27.17■■□□□ 1.94
SEC22C-213ENST00000456222 LPIN2Q92539 896 aa27.17■■□□□ 1.94
SEC22C-213ENST00000456222 SLC5A1P13866 664 aa27.16■■□□□ 1.94
SEC22C-213ENST00000456222 HDLBPQ00341 1268 aaKnown RBP27.16■■□□□ 1.94
SEC22C-213ENST00000456222 TNFAIP1Q13829 316 aa27.16■■□□□ 1.94
SEC22C-213ENST00000456222 GPR25O00155 361 aa27.15■■□□□ 1.94
SEC22C-213ENST00000456222 CIAO1O76071 339 aa27.15■■□□□ 1.94
SEC22C-213ENST00000456222 IREB2P48200 963 aaKnown RBP27.15■■□□□ 1.94
SEC22C-213ENST00000456222 RGS19P49795 217 aa27.15■■□□□ 1.94
SEC22C-213ENST00000456222 TEKT1Q969V4 418 aa27.15■■□□□ 1.94
SEC22C-213ENST00000456222 IGF2BP3O00425 579 aaKnown RBP eCLIP27.14■■□□□ 1.94
SEC22C-213ENST00000456222 INTS3Q68E01 1043 aaKnown RBP27.14■■□□□ 1.94
SEC22C-213ENST00000456222 APOBEC3HQ6NTF7 200 aaKnown RBP27.14■■□□□ 1.94
SEC22C-213ENST00000456222 ZDHHC15Q96MV8 337 aa27.14■■□□□ 1.94
SEC22C-213ENST00000456222 MANSC4A6NHS7 340 aaPredicted RBP27.13■■□□□ 1.93
SEC22C-213ENST00000456222 ZBTB48P10074 688 aaPredicted RBP27.13■■□□□ 1.93
SEC22C-213ENST00000456222 ATP2B3Q16720 1220 aa27.13■■□□□ 1.93
SEC22C-213ENST00000456222 IFNL1Q8IU54 200 aa27.13■■□□□ 1.93
SEC22C-213ENST00000456222 CFHR5Q9BXR6 569 aa27.13■■□□□ 1.93
SEC22C-213ENST00000456222 CENPFP49454 3210 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.12■■□□□ 1.93
SEC22C-213ENST00000456222 ANKRD13AQ8IZ07 590 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 CNKSR2Q8WXI2 1034 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 ARHGAP45Q92619 1136 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 ELP3Q9H9T3 547 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 CEP126Q9P2H0 1117 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 FBXO3Q9UK99 471 aa27.12■■□□□ 1.93
SEC22C-213ENST00000456222 UNCXA6NJT0 531 aa27.11■■□□□ 1.93
SEC22C-213ENST00000456222 BCAR3O75815 825 aa27.11■■□□□ 1.93
SEC22C-213ENST00000456222 ADORA1P30542 326 aa27.11■■□□□ 1.93
SEC22C-213ENST00000456222 PHKA1P46020 1223 aa27.1■■□□□ 1.93
SEC22C-213ENST00000456222 NOM1Q5C9Z4 860 aaKnown RBP27.1■■□□□ 1.93
SEC22C-213ENST00000456222 MRIQ9BWK5 157 aa27.1■■□□□ 1.93
SEC22C-213ENST00000456222 COPRSQ9NQ92 184 aa27.1■■□□□ 1.93
SEC22C-213ENST00000456222 SUGT1Q9Y2Z0 365 aa27.1■■□□□ 1.93
SEC22C-213ENST00000456222 TRIM27P14373 513 aa27.09■■□□□ 1.93
SEC22C-213ENST00000456222 IL15P40933 162 aaPredicted RBP27.09■■□□□ 1.93
SEC22C-213ENST00000456222 TNNI2P48788 182 aa27.09■■□□□ 1.93
SEC22C-213ENST00000456222 WDR66Q8TBY9 1149 aa27.09■■□□□ 1.93
SEC22C-213ENST00000456222 PTPN18Q99952 460 aa27.09■■□□□ 1.93
SEC22C-213ENST00000456222 PRDX5P30044 214 aa27.08■■□□□ 1.93
SEC22C-213ENST00000456222 MLLT1Q03111 559 aaPredicted RBP27.08■■□□□ 1.93
SEC22C-213ENST00000456222 VGLL4Q14135 290 aa27.08■■□□□ 1.93
SEC22C-213ENST00000456222 DIXDC1Q155Q3 683 aa27.08■■□□□ 1.93
SEC22C-213ENST00000456222 HHIPL2Q6UWX4 724 aa27.08■■□□□ 1.93
SEC22C-213ENST00000456222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.08■■□□□ 1.93
SEC22C-213ENST00000456222 OPTNQ96CV9 577 aa27.08■■□□□ 1.93
SEC22C-213ENST00000456222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.08■■□□□ 1.93
SEC22C-213ENST00000456222 MAST3O60307 1309 aa27.08■■□□□ 1.93
SEC22C-213ENST00000456222 SOX10P56693 466 aa27.07■■□□□ 1.92
SEC22C-213ENST00000456222 INHBEP58166 350 aa27.07■■□□□ 1.92
SEC22C-213ENST00000456222 MIER1Q8N108 512 aa27.07■■□□□ 1.92
SEC22C-213ENST00000456222 HPS5Q9UPZ3 1129 aa27.07■■□□□ 1.92
SEC22C-213ENST00000456222 FKTNO75072 461 aa27.06■■□□□ 1.92
SEC22C-213ENST00000456222 DAGLAQ9Y4D2 1042 aa27.06■■□□□ 1.92
SEC22C-213ENST00000456222 SRGAP3O43295 1099 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 ALDH1A1P00352 501 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 TIMM10P62072 90 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 MAP3K9P80192 1104 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 FAM83AQ86UY5 434 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 FRAT1Q92837 279 aaPredicted RBP27.05■■□□□ 1.92
SEC22C-213ENST00000456222 CLUAP1Q96AJ1 413 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 MS4A4AQ96JQ5 239 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 HDAC5Q9UQL6 1122 aa27.05■■□□□ 1.92
SEC22C-213ENST00000456222 TESPA1A2RU30 521 aaPredicted RBP27.04■■□□□ 1.92
SEC22C-213ENST00000456222 GNAI3P08754 354 aa27.04■■□□□ 1.92
SEC22C-213ENST00000456222 MTX1Q13505 466 aa27.04■■□□□ 1.92
SEC22C-213ENST00000456222 FKBP1CQ5VVH2 108 aa27.04■■□□□ 1.92
SEC22C-213ENST00000456222 ATF7IPQ6VMQ6 1270 aa27.04■■□□□ 1.92
SEC22C-213ENST00000456222 TMOD2Q9NZR1 351 aa27.04■■□□□ 1.92
SEC22C-213ENST00000456222 CRHR2Q13324 411 aa27.03■■□□□ 1.92
SEC22C-213ENST00000456222 CCDC102BQ68D86 513 aa27.03■■□□□ 1.92
SEC22C-213ENST00000456222 CDC42EP5Q6NZY7 148 aa27.03■■□□□ 1.92
SEC22C-213ENST00000456222 MYH2Q9UKX2 1941 aa27.03■■□□□ 1.92
SEC22C-213ENST00000456222 TFCP2Q12800 502 aa27.02■■□□□ 1.92
SEC22C-213ENST00000456222 NFIAQ12857 509 aa27.02■■□□□ 1.92
SEC22C-213ENST00000456222 BRI3BPQ8WY22 251 aa27.02■■□□□ 1.92
SEC22C-213ENST00000456222 GNL3LQ9NVN8 582 aaKnown RBP27.02■■□□□ 1.92
SEC22C-213ENST00000456222 SNCAIPQ9Y6H5 919 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms