RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 APBB1IPQ7Z5R6 666 aaPredicted RBP13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 TRIM31Q9BZY9 425 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 SNRKQ9NRH2 765 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 PDE6BP35913 854 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 EXOC1Q9NV70 894 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 IRAK4Q9NWZ3 460 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 NFE2L3Q9Y4A8 694 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 IKBKGQ9Y6K9 419 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 GPIHBP1Q8IV16 184 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
NEDD4L-208ENST00000456173 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 CTNNA2P26232 953 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 ZNF131P52739 623 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 PSME1Q06323 249 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 IQCGQ9H095 443 aaKnown RBP13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 CXorf56Q9H5V9 222 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 NLRP12P59046 1061 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 TCP11L1Q9NUJ3 509 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 GOLGA8KD6RF30 607 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 LRRC23Q53EV4 343 aaPredicted RBP13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 KLHL7Q8IXQ5 586 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 DDX21Q9NR30 783 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 PSDA5PKW4 1024 aaPredicted RBP13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 STAT6P42226 847 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 PAK2Q13177 524 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 KRT71Q3SY84 523 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 LRP2BPQ9P2M1 347 aa13.89□□□□□ -0.19
NEDD4L-208ENST00000456173 TXNDC9O14530 226 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 KIF1CO43896 1103 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 KRT9P35527 623 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 POLE2P56282 527 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 SESN3P58005 492 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 CEP120Q8N960 986 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 PIK3R5Q8WYR1 880 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 ZNF202O95125 648 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 TCHPQ9BT92 498 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 MTRF1LQ9UGC7 380 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 SAR1BQ9Y6B6 198 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 AMPD3Q01432 767 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 GKAP1Q5VSY0 366 aaPredicted RBP13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 MCUR1Q96AQ8 359 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 LRRC45Q96CN5 670 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
NEDD4L-208ENST00000456173 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 PRC1O43663 620 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 ZMYND10O75800 440 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 CIB2O75838 187 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 LUC7L3O95232 432 aaKnown RBP13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 OTUD7BQ6GQQ9 843 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 PYM1Q9BRP8 204 aaKnown RBP13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 GOLGA8FQ08AF8 430 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 GOLGA8DPQ0D2H9 430 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 MAP7Q14244 749 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
NEDD4L-208ENST00000456173 IQCA1Q86XH1 822 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 NOL3O60936 208 aaKnown RBP13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 VAMP4O75379 141 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 CCDC63Q8NA47 563 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 SAAL1Q96ER3 474 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 ABCF2Q9UG63 623 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 MGARPQ8TDB4 240 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 CCDC151A5D8V7 595 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 TMEM110-MUSTN1A8MSY1 372 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 ZBTB43O43298 467 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 SH2D4BQ5SQS7 431 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 CTNND2Q9UQB3 1225 aa13.86□□□□□ -0.19
NEDD4L-208ENST00000456173 FBLN1P23142 703 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 ACTN3Q08043 901 aaPredicted RBP13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 BRAPQ7Z569 592 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 TEX11Q8IYF3 940 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 MYD88Q99836 296 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 YIPF3Q9GZM5 350 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 PI4KAP2A4QPH2 592 aa13.85□□□□□ -0.19
NEDD4L-208ENST00000456173 POTEJP0CG39 1038 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms