RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 AHDC1Q5TGY3 1603 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 CPDO75976 1380 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 IGSF1Q8N6C5 1336 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 MAPK8IP3Q9UPT6 1336 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 ZBTB24O43167 697 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 FGRP09769 529 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 UBE2Q2Q8WVN8 375 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 SAP130Q9H0E3 1048 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 ZNF358Q9NW07 568 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 IFT57Q9NWB7 429 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 AK5Q9Y6K8 562 aa6.61□□□□□ -1.35
HMGB1P4-201ENST00000455362 KDRP35968 1356 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 KIAA0232Q92628 1395 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 RGPD2P0DJD1 1756 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 PHLPP1O60346 1717 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 A0A0G2JS52 829 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 PPP1R12AO14974 1030 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 TLL1O43897 1013 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 DNAJC6O75061 913 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 IGHA2P01877 340 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 NEFMP07197 916 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 RIPK4P57078 832 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 SLFN5Q08AF3 891 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 CHRNA2Q15822 529 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 NBPF6Q5VWK0 638 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 WDR63Q8IWG1 891 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 TRMT44Q8IYL2 757 aaKnown RBP6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 TRMT2AQ8IZ69 625 aaKnown RBP6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 FBF1Q8TES7 1133 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 NBPF4Q96M43 638 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 PCDH12Q9NPG4 1184 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 CHPF2Q9P2E5 772 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 DLG5Q8TDM6 1919 aa6.6□□□□□ -1.35
HMGB1P4-201ENST00000455362 FAM83GA6ND36 823 aa6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 ATF4P18848 351 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 EIF4BP23588 611 aaKnown RBP6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 RAB15P59190 212 aa6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 KCTD15Q96SI1 283 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 C1QTNF2Q9BXJ5 285 aa6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 SRA1Q9HD15 236 aaKnown RBP6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 PRDM11Q9NQV5 511 aa6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 MAGEC2Q9UBF1 373 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
HMGB1P4-201ENST00000455362 ABCA3Q99758 1704 aa6.59□□□□□ -1.36
HMGB1P4-201ENST00000455362 ENPP3O14638 875 aa6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 CTSHP09668 335 aa6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 PTPN12Q05209 780 aaKnown RBP6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 TICAM2Q86XR7 235 aa6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 USHBP1Q8N6Y0 703 aa6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 EMID1Q96A84 441 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 SLKQ9H2G2 1235 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 NEUROD4Q9HD90 331 aa6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 ABCC6O95255 1503 aa6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 COL16A1Q07092 1604 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 COL22A1Q8NFW1 1626 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P4-201ENST00000455362 IL16Q14005 1332 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 PEX14O75381 377 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 MAP4K4O95819 1239 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 S100BP04271 92 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 SSBP05455 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 MZF1P28698 734 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 USP5P45974 858 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 GJA8P48165 433 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 MTHFSDQ2M296 383 aaKnown RBP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 C4orf48Q5BLP8 95 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 DUSP27Q5VZP5 1158 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 TMED8Q6PL24 325 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 TNS4Q8IZW8 715 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 GPRASP2Q96D09 838 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 FCF1Q9Y324 198 aaKnown RBP6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 CAMTA1Q9Y6Y1 1673 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 NCAPD2Q15021 1401 aa6.57□□□□□ -1.36
HMGB1P4-201ENST00000455362 LMO7Q8WWI1 1683 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 PPP1R12BO60237 982 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 LMOD3Q0VAK6 560 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 PAK2Q13177 524 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 PLEKHG6Q3KR16 790 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 COX20Q5RI15 118 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 VASH1Q7L8A9 365 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 MKL1Q969V6 931 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 CSRNP1Q96S65 589 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 POLIQ9UNA4 740 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 FAN1Q9Y2M0 1017 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 CHMP3Q9Y3E7 222 aa6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 SUPT16HQ9Y5B9 1047 aaKnown RBP6.56□□□□□ -1.36
HMGB1P4-201ENST00000455362 WDR17Q8IZU2 1322 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 CCDC194A0A1B0GVG4 234 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 TNFRSF10BO14763 440 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 HTATSF1O43719 755 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 NEFLP07196 543 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 VARSP26640 1264 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 GDF10P55107 478 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 EVA1CP58658 441 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 SH3BP2P78314 561 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 DNM1Q05193 864 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms