RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FAM163AQ96GL9 167 aaPredicted RBP17.38■□□□□ 0.37
HMGXB4-204ENST00000455359 RRAGCQ9HB90 399 aa17.38■□□□□ 0.37
HMGXB4-204ENST00000455359 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
HMGXB4-204ENST00000455359 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
HMGXB4-204ENST00000455359 SCN9AQ15858 1988 aa17.38■□□□□ 0.37
HMGXB4-204ENST00000455359 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 GOLIM4O00461 696 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 LDHCP07864 332 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 PDE4AP27815 886 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 PRDX5P30044 214 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 DZIP1Q86YF9 867 aaKnown RBP17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 ZNF784Q8NCA9 323 aaPredicted RBP17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 ZC3H15Q8WU90 426 aaKnown RBP17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 DNAJC2Q99543 621 aaKnown RBP17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
HMGXB4-204ENST00000455359 F8W031 263 aaPredicted RBP17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 GRIK5Q16478 980 aa17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 ZNF526Q8TF50 670 aaPredicted RBP17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■□ 21.2
HMGXB4-204ENST00000455359 NMRK2Q9NPI5 230 aa17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 PIH1D3Q9NQM4 214 aaKnown RBP17.36■□□□□ 0.37
HMGXB4-204ENST00000455359 MECOMQ03112 1051 aa17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 ZSCAN25Q6NSZ9 544 aa17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 ZBED3Q96IU2 234 aaPredicted RBP17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
HMGXB4-204ENST00000455359 GAKO14976 1311 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 MAP4K4O95819 1239 aaPredicted RBP17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 CRKP46108 304 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 NAA16Q6N069 864 aaPredicted RBP17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 CERS3Q8IU89 383 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 KBTBD3Q8NAB2 608 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 PSME4Q14997 1843 aa17.34■□□□□ 0.37
HMGXB4-204ENST00000455359 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 SPDYE2BA6NHP3 402 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 MYO1BO43795 1136 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 SPDYE6P0CI01 402 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 TBC1D10BQ4KMP7 808 aaPredicted RBP17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 SAMD7Q7Z3H4 446 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 PGAP2Q9UHJ9 254 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
HMGXB4-204ENST00000455359 RBM5P52756 815 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 CNTROBQ8N137 903 aa17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 TRPM4Q8TD43 1214 aa17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 DAGLAQ9Y4D2 1042 aa17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
HMGXB4-204ENST00000455359 GPR75-ASB3A0A0A6YYF3 556 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 WNT10BO00744 389 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 KIF3CO14782 793 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 HIRAP54198 1017 aaPredicted RBP17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 DIXDC1Q155Q3 683 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 SCN4AP35499 1836 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
HMGXB4-204ENST00000455359 BAG3O95817 575 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 EGFRP00533 1210 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 PDE6AP16499 860 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 PLCG2P16885 1265 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 PPP4CP60510 307 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 FKBP1CQ5VVH2 108 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 PRMT6Q96LA8 375 aaPredicted RBP17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 NOL10Q9BSC4 688 aaKnown RBP17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 RFX7Q2KHR2 1363 aa17.3■□□□□ 0.36
HMGXB4-204ENST00000455359 CYP7A1P22680 504 aa17.29■□□□□ 0.36
HMGXB4-204ENST00000455359 ADD2P35612 726 aa17.29■□□□□ 0.36
HMGXB4-204ENST00000455359 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
HMGXB4-204ENST00000455359 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
HMGXB4-204ENST00000455359 AKAP11Q9UKA4 1901 aa17.29■□□□□ 0.36
HMGXB4-204ENST00000455359 ZNF646O15015 1829 aaPredicted RBP17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 TOMM70O94826 608 aa17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
HMGXB4-204ENST00000455359 TCRBV5S4A2TA0A5A2 114 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 TRIM6-TRIM34B2RNG4 842 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 HIP1O00291 1037 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 BTDP43251 543 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 TNFAIP1Q13829 316 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms