RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 GJA5P36382 358 aa29.86■■■□□ 2.37
LYSMD2-202ENST00000454181 ZEB1P37275 1124 aaPredicted RBP29.86■■■□□ 2.37
LYSMD2-202ENST00000454181 INTS3Q68E01 1043 aaKnown RBP29.86■■■□□ 2.37
LYSMD2-202ENST00000454181 TBC1D22AQ8WUA7 517 aa29.86■■■□□ 2.37
LYSMD2-202ENST00000454181 BICC1Q9H694 974 aaKnown RBP29.86■■■□□ 2.37
LYSMD2-202ENST00000454181 IQSEC3Q9UPP2 1182 aaPredicted RBP29.86■■■□□ 2.37
LYSMD2-202ENST00000454181 FBXO33Q7Z6M2 555 aa29.85■■■□□ 2.37
LYSMD2-202ENST00000454181 CSADQ9Y600 493 aa29.84■■■□□ 2.37
LYSMD2-202ENST00000454181 UTYO14607 1347 aa29.84■■■□□ 2.37
LYSMD2-202ENST00000454181 TESPA1A2RU30 521 aaPredicted RBP29.83■■■□□ 2.37
LYSMD2-202ENST00000454181 MAP3K9P80192 1104 aa29.83■■■□□ 2.37
LYSMD2-202ENST00000454181 SP3Q02447 781 aa29.83■■■□□ 2.37
LYSMD2-202ENST00000454181 CD99L2Q8TCZ2 262 aa29.83■■■□□ 2.37
LYSMD2-202ENST00000454181 TMEM39BQ9GZU3 492 aa29.83■■■□□ 2.37
LYSMD2-202ENST00000454181 EFCC1Q9HA90 598 aa29.83■■■□□ 2.37
LYSMD2-202ENST00000454181 HDLBPQ00341 1268 aaKnown RBP29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 RABL6Q3YEC7 729 aaPredicted RBP29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 LRRC24Q50LG9 513 aa29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 TEKT1Q969V4 418 aa29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 TEPSINQ96N21 525 aa29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 PTPN18Q99952 460 aa29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 TMOD2Q9NZR1 351 aa29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 PCDH10Q9P2E7 1040 aa29.82■■■□□ 2.36
LYSMD2-202ENST00000454181 PDE8BO95263 885 aa29.81■■■□□ 2.36
LYSMD2-202ENST00000454181 PTPN22Q9Y2R2 807 aa29.81■■■□□ 2.36
LYSMD2-202ENST00000454181 WDHD1O75717 1129 aaPredicted RBP29.8■■■□□ 2.36
LYSMD2-202ENST00000454181 GTF2A2P52657 109 aa29.8■■■□□ 2.36
LYSMD2-202ENST00000454181 ARHGEF6Q15052 776 aa29.8■■■□□ 2.36
LYSMD2-202ENST00000454181 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.8■■■□□ 2.36
LYSMD2-202ENST00000454181 PTPRCP08575 1304 aa29.79■■■□□ 2.36
LYSMD2-202ENST00000454181 VGLL4Q14135 290 aa29.79■■■□□ 2.36
LYSMD2-202ENST00000454181 CDAN1Q8IWY9 1227 aa29.79■■■□□ 2.36
LYSMD2-202ENST00000454181 MRPL50Q8N5N7 158 aaKnown RBP29.79■■■□□ 2.36
LYSMD2-202ENST00000454181 ZFYVE28Q9HCC9 887 aa29.79■■■□□ 2.36
LYSMD2-202ENST00000454181 CCL15-CCL14A0A0B4J2E2 113 aa29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 IFIT1P09914 478 aaKnown RBP29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 GRIK5Q16478 980 aa29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 CCL15Q16663 113 aa29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 ANKRD44Q8N8A2 993 aa29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 HOOK2Q96ED9 719 aa29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 MS4A4AQ96JQ5 239 aa29.78■■■□□ 2.36
LYSMD2-202ENST00000454181 TAF1CQ15572 869 aaPredicted RBP29.77■■■□□ 2.36
LYSMD2-202ENST00000454181 CNKSR2Q8WXI2 1034 aa29.77■■■□□ 2.36
LYSMD2-202ENST00000454181 OTUD5Q96G74 571 aa29.77■■■□□ 2.36
LYSMD2-202ENST00000454181 MAST3O60307 1309 aa29.76■■■□□ 2.36
LYSMD2-202ENST00000454181 BCAMP50895 628 aa29.76■■■□□ 2.35
LYSMD2-202ENST00000454181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.76■■■□□ 2.35
LYSMD2-202ENST00000454181 BRI3BPQ8WY22 251 aa29.76■■■□□ 2.35
LYSMD2-202ENST00000454181 CACNB3P54284 484 aa29.75■■■□□ 2.35
LYSMD2-202ENST00000454181 PUM3Q15397 648 aaKnown RBP29.75■■■□□ 2.35
LYSMD2-202ENST00000454181 KLHDC4Q8TBB5 520 aa29.75■■■□□ 2.35
LYSMD2-202ENST00000454181 ZDHHC15Q96MV8 337 aa29.75■■■□□ 2.35
LYSMD2-202ENST00000454181 MRIQ9BWK5 157 aa29.75■■■□□ 2.35
LYSMD2-202ENST00000454181 SUGT1Q9Y2Z0 365 aa29.75■■■□□ 2.35
LYSMD2-202ENST00000454181 VGLL2Q8N8G2 317 aa29.74■■■□□ 2.35
LYSMD2-202ENST00000454181 POTEFA5A3E0 1075 aa29.73■■■□□ 2.35
LYSMD2-202ENST00000454181 ZNF521Q96K83 1311 aa29.72■■■□□ 2.35
LYSMD2-202ENST00000454181 E9PSI1 815 aa29.72■■■□□ 2.35
LYSMD2-202ENST00000454181 FAM83AQ86UY5 434 aa29.72■■■□□ 2.35
LYSMD2-202ENST00000454181 WRNIP1Q96S55 665 aa29.72■■■□□ 2.35
LYSMD2-202ENST00000454181 USP44Q9H0E7 712 aa29.72■■■□□ 2.35
LYSMD2-202ENST00000454181 LAMB1P07942 1786 aa29.72■■■□□ 2.35
LYSMD2-202ENST00000454181 ARAP2Q8WZ64 1704 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 SPDYE5A6NIY4 337 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 CETPP11597 493 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 SLC5A1P13866 664 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 FKBP1CQ5VVH2 108 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 DCAF15Q66K64 600 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 ERO1BQ86YB8 467 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 SSH1Q8WYL5 1049 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 ARMC5Q96C12 935 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 GCC1Q96CN9 775 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 TMEM106CQ9BVX2 250 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 KIF16BQ96L93 1317 aa29.71■■■□□ 2.35
LYSMD2-202ENST00000454181 EYA2O00167 538 aa29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 APOBEC3HQ6NTF7 200 aaKnown RBP29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 HHIPL2Q6UWX4 724 aa29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 NBPF11Q86T75 865 aa29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 FAM43AQ8N2R8 423 aa29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 WDR66Q8TBY9 1149 aa29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 OTOFQ9HC10 1997 aa29.69■■■□□ 2.34
LYSMD2-202ENST00000454181 SNAPC2Q13487 334 aa29.68■■■□□ 2.34
LYSMD2-202ENST00000454181 KIF22Q14807 665 aa29.68■■■□□ 2.34
LYSMD2-202ENST00000454181 LPIN2Q92539 896 aa29.68■■■□□ 2.34
LYSMD2-202ENST00000454181 SNCAIPQ9Y6H5 919 aa29.68■■■□□ 2.34
LYSMD2-202ENST00000454181 FGFR2P21802 821 aa29.67■■■□□ 2.34
LYSMD2-202ENST00000454181 ZKSCAN4Q969J2 545 aaPredicted RBP29.67■■■□□ 2.34
LYSMD2-202ENST00000454181 SLC9C1Q4G0N8 1177 aa29.66■■■□□ 2.34
LYSMD2-202ENST00000454181 ZNF341Q9BYN7 854 aa29.66■■■□□ 2.34
LYSMD2-202ENST00000454181 ZCCHC17Q9NP64 241 aaKnown RBP29.65■■■□□ 2.34
LYSMD2-202ENST00000454181 EN2P19622 333 aaPredicted RBP29.64■■■□□ 2.34
LYSMD2-202ENST00000454181 PPIL2Q13356 520 aa29.64■■■□□ 2.34
LYSMD2-202ENST00000454181 MIGA2Q7L4E1 593 aa29.64■■■□□ 2.34
LYSMD2-202ENST00000454181 GNL3LQ9NVN8 582 aaKnown RBP29.64■■■□□ 2.34
LYSMD2-202ENST00000454181 IRF6O14896 467 aa29.63■■■□□ 2.33
LYSMD2-202ENST00000454181 TLR2O60603 784 aa29.63■■■□□ 2.33
LYSMD2-202ENST00000454181 CAP1Q01518 475 aa29.63■■■□□ 2.33
LYSMD2-202ENST00000454181 SMC4Q9NTJ3 1288 aa29.63■■■□□ 2.33
LYSMD2-202ENST00000454181 PTCH2Q9Y6C5 1203 aa29.63■■■□□ 2.33
LYSMD2-202ENST00000454181 SLC4A8Q2Y0W8 1093 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms