RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 C2CD5Q86YS7 1000 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.8
LMO3-210ENST00000453727 FEZ1Q99689 392 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 MTFR1LQ9H019 292 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 NSFL1CQ9UNZ2 370 aaKnown RBP10.08□□□□□ -0.8
LMO3-210ENST00000453727 COL11A2P13942 1736 aaPredicted RBP10.08□□□□□ -0.8
LMO3-210ENST00000453727 KLRK1P26718 216 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 CHRNA5P30532 468 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 ZMYM1Q5SVZ6 1142 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 SPATA5Q8NB90 893 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 MAP4K1Q92918 833 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 PIH1D3Q9NQM4 214 aaKnown RBP10.08□□□□□ -0.8
LMO3-210ENST00000453727 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 ILDR2Q71H61 639 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 IL17RAQ96F46 866 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 HELLSQ9NRZ9 838 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 XDHP47989 1333 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 GABPB1Q06547 395 aaPredicted RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 TTF1Q15361 905 aaPredicted RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 PRPF40BQ6NWY9 871 aaKnown RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 TMC4Q7Z404 712 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 VPS37DQ86XT2 251 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 FAM84BQ96KN1 310 aaPredicted RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 RBM8AQ9Y5S9 174 aaKnown RBP10.07□□□□□ -0.8
LMO3-210ENST00000453727 SNX14Q9Y5W7 946 aa10.07□□□□□ -0.8
LMO3-210ENST00000453727 POLD1P28340 1107 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 GPSM2P81274 684 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 NECTIN1Q15223 517 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 TSPYL1Q9H0U9 437 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 OGFRQ9NZT2 677 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 ATP6V0A2Q9Y487 856 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 MAST3O60307 1309 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 SRCAPQ6ZRS2 3230 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 M0R2C6 588 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 IDH1O75874 414 aaKnown RBP10.06□□□□□ -0.8
LMO3-210ENST00000453727 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
LMO3-210ENST00000453727 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
LMO3-210ENST00000453727 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 CAVIN1Q6NZI2 390 aaKnown RBP10.06□□□□□ -0.8
LMO3-210ENST00000453727 LEMD3Q9Y2U8 911 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 C10orf71Q711Q0 1435 aa10.06□□□□□ -0.8
LMO3-210ENST00000453727 COL1A1P02452 1464 aaPredicted RBP10.06□□□□□ -0.8
LMO3-210ENST00000453727 MYH13Q9UKX3 1938 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
LMO3-210ENST00000453727 NEK4P51957 841 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 SLC9C2Q5TAH2 1124 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 FBXO33Q7Z6M2 555 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 KCNB2Q92953 911 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.05□□□□□ -0.8
LMO3-210ENST00000453727 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 CACNA1SQ13698 1873 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 IRS2Q9Y4H2 1338 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 UFL1O94874 794 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 ADD2P35612 726 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 VPS53Q5VIR6 699 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 CREB3L3Q68CJ9 461 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 APPBP2Q92624 585 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 CNKSR1Q969H4 720 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
LMO3-210ENST00000453727 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
LMO3-210ENST00000453727 TMX4Q9H1E5 349 aaPredicted RBP10.05□□□□□ -0.8
LMO3-210ENST00000453727 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
LMO3-210ENST00000453727 GGA1Q9UJY5 639 aa10.05□□□□□ -0.8
LMO3-210ENST00000453727 K7ELQ4 463 aaPredicted RBP10.04□□□□□ -0.8
LMO3-210ENST00000453727 SLC27A2O14975 620 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 ST18O60284 1047 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 PDE6AP16499 860 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 HIBADHP31937 336 aaKnown RBP10.04□□□□□ -0.8
LMO3-210ENST00000453727 CHAF1AQ13111 956 aaPredicted RBP10.04□□□□□ -0.8
LMO3-210ENST00000453727 ZSCAN25Q6NSZ9 544 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 GPR101Q96P66 508 aaPredicted RBP10.04□□□□□ -0.8
LMO3-210ENST00000453727 CALCOCO1Q9P1Z2 691 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 LRRC37AA6NMS7 1700 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 UTRNP46939 3433 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 ZNF532Q9HCE3 1301 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 ATP2B4P23634 1241 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 TBC1D16Q8TBP0 767 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 POLLQ9UGP5 575 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 TAF6LQ9Y6J9 622 aa10.04□□□□□ -0.8
LMO3-210ENST00000453727 A0A0G2JLW4 131 aa10.03□□□□□ -0.8
LMO3-210ENST00000453727 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
LMO3-210ENST00000453727 APPP05067 770 aa10.03□□□□□ -0.8
LMO3-210ENST00000453727 HSPD1P10809 573 aaKnown RBP10.03□□□□□ -0.8
LMO3-210ENST00000453727 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
LMO3-210ENST00000453727 MPNDQ8N594 471 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms