RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 SASH1O94885 1247 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 ATG9AQ7Z3C6 839 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 TMEM57Q8N5G2 664 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 HDAC9Q9UKV0 1011 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 TLL2Q9Y6L7 1015 aa11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
CDC42EP3-203ENST00000453555 WNT10BO00744 389 aa11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 CAVIN4Q5BKX8 364 aa11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 VPS37DQ86XT2 251 aa11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 TDRD7Q8NHU6 1098 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-203ENST00000453555 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 IFIT1P09914 478 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 FGFR2P21802 821 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 BCAMP50895 628 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 FBXO33Q7Z6M2 555 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 CAPNS2Q96L46 248 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 FAM205AQ6ZU69 1335 aa11.78□□□□□ -0.52
CDC42EP3-203ENST00000453555 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 SRGAP3O43295 1099 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 CIAO1O76071 339 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 GNAI2P04899 355 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 SLC5A1P13866 664 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 MMP14P50281 582 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 DLGAP5Q15398 846 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 GBA2Q9HCG7 927 aaPredicted RBP11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
CDC42EP3-203ENST00000453555 THSD7BQ9C0I4 1608 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 AOC2O75106 756 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 RLBP1P12271 317 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 ECE1P42892 770 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 HUNKP57058 714 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 CFAP100Q494V2 611 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 LPIN2Q92539 896 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 COPRSQ9NQ92 184 aa11.76□□□□□ -0.53
CDC42EP3-203ENST00000453555 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 MTX1Q13505 466 aa11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 GRIK5Q16478 980 aa11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 ZBED3Q96IU2 234 aaPredicted RBP11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
CDC42EP3-203ENST00000453555 PCNTO95613 3336 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 TFCP2Q12800 502 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 PANK1Q8TE04 598 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 PRMT6Q96LA8 375 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 AOX1Q06278 1338 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
CDC42EP3-203ENST00000453555 FOXN1O15353 648 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 MYO1BO43795 1136 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 ADORA1P30542 326 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 TIMM10P62072 90 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 PRKG1Q13976 671 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 RGMBQ6NW40 437 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 MOB2Q70IA6 237 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 APOBEC3FQ8IUX4 373 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 AIDAQ96BJ3 306 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
CDC42EP3-203ENST00000453555 COL1A1P02452 1464 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 PHKA1P46020 1223 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 CRKP46108 304 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 ZNF157P51786 506 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 MAP2K1Q02750 393 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 COL13A1Q5TAT6 717 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 TDRD3Q9H7E2 651 aaKnown RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 AKAP11Q9UKA4 1901 aa11.72□□□□□ -0.53
CDC42EP3-203ENST00000453555 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms