RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 LAMB1P07942 1786 aa17.58■□□□□ 0.4
RFTN1-207ENST00000453536 FRAT2O75474 233 aaPredicted RBP17.57■□□□□ 0.4
RFTN1-207ENST00000453536 RASA3Q14644 834 aa17.57■□□□□ 0.4
RFTN1-207ENST00000453536 DIXDC1Q155Q3 683 aa17.57■□□□□ 0.4
RFTN1-207ENST00000453536 SPDYE2Q495Y8 402 aa17.57■□□□□ 0.4
RFTN1-207ENST00000453536 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
RFTN1-207ENST00000453536 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
RFTN1-207ENST00000453536 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 IFIT1P09914 478 aaKnown RBP17.56■□□□□ 0.4
RFTN1-207ENST00000453536 SLC5A1P13866 664 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 PRDX5P30044 214 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 TIMM10P62072 90 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 TFCP2Q12800 502 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 CAVIN4Q5BKX8 364 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 CCDC102AQ96A19 550 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 R3HDMLQ9H3Y0 253 aa17.56■□□□□ 0.4
RFTN1-207ENST00000453536 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
RFTN1-207ENST00000453536 GJA5P36382 358 aa17.55■□□□□ 0.4
RFTN1-207ENST00000453536 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
RFTN1-207ENST00000453536 LPIN2Q92539 896 aa17.55■□□□□ 0.4
RFTN1-207ENST00000453536 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
RFTN1-207ENST00000453536 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
RFTN1-207ENST00000453536 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 CIAO1O76071 339 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 FKBP1BP68106 108 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 LDLRAD1Q5T700 205 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 PI16Q6UXB8 463 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 CEP126Q9P2H0 1117 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 SERPINA10Q9UK55 444 aa17.54■□□□□ 0.4
RFTN1-207ENST00000453536 USP2O75604 605 aaPredicted RBP17.53■□□□□ 0.4
RFTN1-207ENST00000453536 TBC1D8O95759 1140 aa17.53■□□□□ 0.4
RFTN1-207ENST00000453536 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
RFTN1-207ENST00000453536 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
RFTN1-207ENST00000453536 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
RFTN1-207ENST00000453536 ZSWIM8A7E2V4 1837 aa17.52■□□□□ 0.4
RFTN1-207ENST00000453536 NF2P35240 595 aa17.52■□□□□ 0.4
RFTN1-207ENST00000453536 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
RFTN1-207ENST00000453536 A0A1B0GUL7 405 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 MYO1BO43795 1136 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 GNAI3P08754 354 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 IL15P40933 162 aaPredicted RBP17.51■□□□□ 0.39
RFTN1-207ENST00000453536 MTX1Q13505 466 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 RASGRF1Q13972 1273 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 CCDC102BQ68D86 513 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 MCOLN1Q9GZU1 580 aa17.51■□□□□ 0.39
RFTN1-207ENST00000453536 DOCK2Q92608 1830 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 GNAI2P04899 355 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 NFIAQ12857 509 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 SPRYD7Q5W111 196 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 TEKT1Q969V4 418 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 XAGE2Q96GT9 111 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
RFTN1-207ENST00000453536 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
RFTN1-207ENST00000453536 MMP14P50281 582 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 ZFPM1Q8IX07 1006 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 ZNF384Q8TF68 577 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 TBC1D22AQ8WUA7 517 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
RFTN1-207ENST00000453536 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
RFTN1-207ENST00000453536 IGF2BP3O00425 579 aaKnown RBP eCLIP17.48■□□□□ 0.39
RFTN1-207ENST00000453536 DGKZQ13574 1117 aa17.48■□□□□ 0.39
RFTN1-207ENST00000453536 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-207ENST00000453536 ZDHHC15Q96MV8 337 aa17.48■□□□□ 0.39
RFTN1-207ENST00000453536 HTTP42858 3142 aa17.48■□□□□ 0.39
RFTN1-207ENST00000453536 CA12O43570 354 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 TCP10Q12799 353 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 TBC1D9Q6ZT07 1266 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 NEUROD6Q96NK8 337 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 PPP2R3BQ9Y5P8 575 aa17.47■□□□□ 0.39
RFTN1-207ENST00000453536 CAP1Q01518 475 aa17.46■□□□□ 0.39
RFTN1-207ENST00000453536 POLA2Q14181 598 aa17.46■□□□□ 0.39
RFTN1-207ENST00000453536 MIGA2Q7L4E1 593 aa17.46■□□□□ 0.39
RFTN1-207ENST00000453536 WDR66Q8TBY9 1149 aa17.46■□□□□ 0.39
RFTN1-207ENST00000453536 SLC10A4Q96EP9 437 aa17.46■□□□□ 0.39
RFTN1-207ENST00000453536 SAGE1Q9NXZ1 904 aa17.46■□□□□ 0.39
RFTN1-207ENST00000453536 TLR7Q9NYK1 1049 aaKnown RBP17.46■□□□□ 0.39
RFTN1-207ENST00000453536 CENPFP49454 3210 aa17.45■□□□□ 0.38
RFTN1-207ENST00000453536 CCDC85CA6NKD9 419 aa17.45■□□□□ 0.38
RFTN1-207ENST00000453536 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-207ENST00000453536 VGLL4Q14135 290 aa17.45■□□□□ 0.38
RFTN1-207ENST00000453536 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
RFTN1-207ENST00000453536 PTPN18Q99952 460 aa17.45■□□□□ 0.38
RFTN1-207ENST00000453536 FAM198AQ9UFP1 575 aa17.45■□□□□ 0.38
RFTN1-207ENST00000453536 MAST2Q6P0Q8 1798 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 PPP1R12BO60237 982 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-207ENST00000453536 LDHBP07195 334 aaKnown RBP17.44■□□□□ 0.38
RFTN1-207ENST00000453536 TM4SF4P48230 202 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
RFTN1-207ENST00000453536 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.38
RFTN1-207ENST00000453536 ZNF296Q8WUU4 475 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-207ENST00000453536 ZKSCAN4Q969J2 545 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms