RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TAF6LQ9Y6J9 622 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 U3KPZ7 1027 aaPredicted RBP7.2□□□□□ -1.26
SDC4P-201ENST00000453285 FAM205AQ6ZU69 1335 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 NAV1Q8NEY1 1877 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 C21orf2O43822 256 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 IGSF3O75054 1194 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 FRAT2O75474 233 aaPredicted RBP7.19□□□□□ -1.26
SDC4P-201ENST00000453285 CYP7A1P22680 504 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 PRDX5P30044 214 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 MECOMQ03112 1051 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
SDC4P-201ENST00000453285 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
SDC4P-201ENST00000453285 ADCK5Q3MIX3 580 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 ERICH6Q7L0X2 663 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 PIAS4Q8N2W9 510 aaPredicted RBP7.19□□□□□ -1.26
SDC4P-201ENST00000453285 ZC3H12CQ9C0D7 883 aaKnown RBP7.19□□□□□ -1.26
SDC4P-201ENST00000453285 RAI14Q9P0K7 980 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 ZNF219Q9P2Y4 722 aaPredicted RBP7.19□□□□□ -1.26
SDC4P-201ENST00000453285 JAG2Q9Y219 1238 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 MYH8P13535 1937 aa7.19□□□□□ -1.26
SDC4P-201ENST00000453285 MBD4O95243 580 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 FGAP02671 866 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 CYP21A2P08686 494 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 ALX1Q15699 326 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 DOK7Q18PE1 504 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 GRIPAP1Q4V328 841 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 SPTY2D1Q68D10 685 aaPredicted RBP7.18□□□□□ -1.26
SDC4P-201ENST00000453285 TTLL5Q6EMB2 1281 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 TMED8Q6PL24 325 aaPredicted RBP7.18□□□□□ -1.26
SDC4P-201ENST00000453285 LCORLQ8N3X6 602 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 ZGPATQ8N5A5 531 aaKnown RBP7.18□□□□□ -1.26
SDC4P-201ENST00000453285 TTC14Q96N46 770 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 EYA3Q99504 573 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 RIOK1Q9BRS2 568 aaKnown RBP7.18□□□□□ -1.26
SDC4P-201ENST00000453285 TM6SF1Q9BZW5 370 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 TMX4Q9H1E5 349 aaPredicted RBP7.18□□□□□ -1.26
SDC4P-201ENST00000453285 ARMT1Q9H993 441 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 ZSWIM6Q9HCJ5 1215 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 CD2APQ9Y5K6 639 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 COL4A5P29400 1685 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 RPAP1Q9BWH6 1393 aaPredicted RBP7.18□□□□□ -1.26
SDC4P-201ENST00000453285 TIAM2Q8IVF5 1701 aa7.18□□□□□ -1.26
SDC4P-201ENST00000453285 MAGEB6P1A0A0J9YX57 407 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 GSG1L2A8MUP6 293 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 PATL2C9JE40 543 aaKnown RBP7.17□□□□□ -1.26
SDC4P-201ENST00000453285 PRKAB2O43741 272 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 NEK4P51957 841 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 DYNLL1P63167 89 aaKnown RBP7.17□□□□□ -1.26
SDC4P-201ENST00000453285 GTF2IP78347 998 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 KIAA2012Q0VF49 1180 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 BECN1Q14457 450 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 CCDC93Q567U6 631 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 RNF20Q5VTR2 975 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 NAA16Q6N069 864 aaPredicted RBP7.17□□□□□ -1.26
SDC4P-201ENST00000453285 STOX1Q6ZVD7 989 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 IFNL3Q8IZI9 196 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 CERS5Q8N5B7 392 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 MIGA1Q8NAN2 632 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 IL27Q8NEV9 243 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 AIDAQ96BJ3 306 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 PSMD1Q99460 953 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 UPF3BQ9BZI7 483 aaKnown RBP7.17□□□□□ -1.26
SDC4P-201ENST00000453285 EPB41L4AQ9HCS5 686 aaPredicted RBP7.17□□□□□ -1.26
SDC4P-201ENST00000453285 KCNQ5Q9NR82 932 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 PIM2Q9P1W9 311 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 DDX60LQ5H9U9 1706 aaKnown RBP7.17□□□□□ -1.26
SDC4P-201ENST00000453285 ZMYM6O95789 1325 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 TCHHQ07283 1943 aa7.17□□□□□ -1.26
SDC4P-201ENST00000453285 K7ELQ4 463 aaPredicted RBP7.16□□□□□ -1.26
SDC4P-201ENST00000453285 LDHBP07195 334 aaKnown RBP7.16□□□□□ -1.26
SDC4P-201ENST00000453285 CPA1P15085 419 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 ZKSCAN1P17029 563 aaPredicted RBP7.16□□□□□ -1.26
SDC4P-201ENST00000453285 GNAT2P19087 354 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 PPP4CP60510 307 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 AOC3Q16853 763 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 MFSD14BQ5SR56 506 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 RUFY3Q7L099 469 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 HSCBQ8IWL3 235 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 RTKN2Q8IZC4 609 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 SUPT20HQ8NEM7 779 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 TBC1D22AQ8WUA7 517 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 FAM163AQ96GL9 167 aaPredicted RBP7.16□□□□□ -1.26
SDC4P-201ENST00000453285 JAKMIP1Q96N16 626 aaKnown RBP7.16□□□□□ -1.26
SDC4P-201ENST00000453285 NBPF3Q9H094 633 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 ALDH8A1Q9H2A2 487 aaPredicted RBP7.16□□□□□ -1.26
SDC4P-201ENST00000453285 DBNDD1Q9H9R9 158 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 CTNNA3Q9UI47 895 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 SUGT1Q9Y2Z0 365 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 TACC3Q9Y6A5 838 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 MYH6P13533 1939 aa7.16□□□□□ -1.26
SDC4P-201ENST00000453285 POLR2AP24928 1970 aaKnown RBP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 GPR75-ASB3A0A0A6YYF3 556 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 YDJCA8MPS7 323 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 E7EWF7 191 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 ST18O60284 1047 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 ECE2O60344 883 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 LDHCP07864 332 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 RPS6KB1P23443 525 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms