RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 LDLRAD1Q5T700 205 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
CHD3-206ENST00000452447 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
CHD3-206ENST00000452447 FZD1Q9UP38 647 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 AOX1Q06278 1338 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 BCAR3O75815 825 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 TRIM27P14373 513 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 IL15P40933 162 aaPredicted RBP16.04■□□□□ 0.16
CHD3-206ENST00000452447 HDLBPQ00341 1268 aaKnown RBP16.04■□□□□ 0.16
CHD3-206ENST00000452447 ATP2B3Q16720 1220 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 ATF7IPQ6VMQ6 1270 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 TEKT1Q969V4 418 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.04■□□□□ 0.16
CHD3-206ENST00000452447 SUGT1Q9Y2Z0 365 aa16.04■□□□□ 0.16
CHD3-206ENST00000452447 TNNI2P48788 182 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 SREBF2Q12772 1141 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 GRIK5Q16478 980 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
CHD3-206ENST00000452447 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 SLC10A4Q96EP9 437 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 COPRSQ9NQ92 184 aa16.03■□□□□ 0.16
CHD3-206ENST00000452447 GNL3LQ9NVN8 582 aaKnown RBP16.03■□□□□ 0.16
CHD3-206ENST00000452447 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
CHD3-206ENST00000452447 MAST3O60307 1309 aa16.02■□□□□ 0.16
CHD3-206ENST00000452447 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
CHD3-206ENST00000452447 IREB2P48200 963 aaKnown RBP16.02■□□□□ 0.16
CHD3-206ENST00000452447 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
CHD3-206ENST00000452447 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
CHD3-206ENST00000452447 DGKZQ13574 1117 aa16.01■□□□□ 0.15
CHD3-206ENST00000452447 SPRYD7Q5W111 196 aa16.01■□□□□ 0.15
CHD3-206ENST00000452447 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
CHD3-206ENST00000452447 MRIQ9BWK5 157 aa16.01■□□□□ 0.15
CHD3-206ENST00000452447 TM4SF4P48230 202 aa16■□□□□ 0.15
CHD3-206ENST00000452447 ZKSCAN2Q63HK3 967 aa16■□□□□ 0.15
CHD3-206ENST00000452447 ZDHHC15Q96MV8 337 aa16■□□□□ 0.15
CHD3-206ENST00000452447 MCOLN1Q9GZU1 580 aa16■□□□□ 0.15
CHD3-206ENST00000452447 TMOD2Q9NZR1 351 aa16■□□□□ 0.15
CHD3-206ENST00000452447 SSC5DA1L4H1 1573 aa16■□□□□ 0.15
CHD3-206ENST00000452447 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
CHD3-206ENST00000452447 USP2O75604 605 aaPredicted RBP16■□□□□ 0.15
CHD3-206ENST00000452447 GNAI2P04899 355 aa16■□□□□ 0.15
CHD3-206ENST00000452447 ZBTB48P10074 688 aaPredicted RBP15.99■□□□□ 0.15
CHD3-206ENST00000452447 MTX1Q13505 466 aa15.99■□□□□ 0.15
CHD3-206ENST00000452447 HHIPL2Q6UWX4 724 aa15.99■□□□□ 0.15
CHD3-206ENST00000452447 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
CHD3-206ENST00000452447 CLMNQ96JQ2 1002 aa15.99■□□□□ 0.15
CHD3-206ENST00000452447 TMEM39BQ9GZU3 492 aa15.99■□□□□ 0.15
CHD3-206ENST00000452447 TNNQ9UQP3 1299 aa15.99■□□□□ 0.15
CHD3-206ENST00000452447 MANSC4A6NHS7 340 aaPredicted RBP15.98■□□□□ 0.15
CHD3-206ENST00000452447 SEMA3EO15041 775 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 TBC1D8O95759 1140 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 CACNB3P54284 484 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 INHBEP58166 350 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 DENND2AQ9ULE3 1009 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 AKAP2Q9Y2D5 859 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 AK9Q5TCS8 1911 aa15.98■□□□□ 0.15
CHD3-206ENST00000452447 PHKA1P46020 1223 aa15.97■□□□□ 0.15
CHD3-206ENST00000452447 APOBEC3HQ6NTF7 200 aaKnown RBP15.97■□□□□ 0.15
CHD3-206ENST00000452447 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
CHD3-206ENST00000452447 TEPSINQ96N21 525 aa15.97■□□□□ 0.15
CHD3-206ENST00000452447 ALDH1A1P00352 501 aa15.96■□□□□ 0.15
CHD3-206ENST00000452447 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
CHD3-206ENST00000452447 ADORA1P30542 326 aa15.96■□□□□ 0.15
CHD3-206ENST00000452447 TIMM10P62072 90 aa15.96■□□□□ 0.15
CHD3-206ENST00000452447 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
CHD3-206ENST00000452447 FTSJ3Q8IY81 847 aaKnown RBP15.96■□□□□ 0.15
CHD3-206ENST00000452447 TMEM57Q8N5G2 664 aa15.96■□□□□ 0.15
CHD3-206ENST00000452447 PRDX5P30044 214 aa15.96■□□□□ 0.14
CHD3-206ENST00000452447 TFCP2Q12800 502 aa15.96■□□□□ 0.14
CHD3-206ENST00000452447 FKBP1CQ5VVH2 108 aa15.96■□□□□ 0.14
CHD3-206ENST00000452447 FAM83AQ86UY5 434 aa15.96■□□□□ 0.14
CHD3-206ENST00000452447 CDAN1Q8IWY9 1227 aa15.96■□□□□ 0.14
CHD3-206ENST00000452447 ZGPATQ8N5A5 531 aaKnown RBP15.96■□□□□ 0.14
CHD3-206ENST00000452447 A0A1B0GUL7 405 aa15.95■□□□□ 0.14
CHD3-206ENST00000452447 G3BP1Q13283 466 aaKnown RBP eCLIP15.95■□□□□ 0.14
CHD3-206ENST00000452447 DIXDC1Q155Q3 683 aa15.95■□□□□ 0.14
CHD3-206ENST00000452447 ZNF296Q8WUU4 475 aaPredicted RBP15.95■□□□□ 0.14
CHD3-206ENST00000452447 HOOK2Q96ED9 719 aa15.95■□□□□ 0.14
CHD3-206ENST00000452447 NEUROD6Q96NK8 337 aa15.95■□□□□ 0.14
CHD3-206ENST00000452447 ZBED9Q6R2W3 1325 aa15.95■□□□□ 0.14
CHD3-206ENST00000452447 SALL1Q9NSC2 1324 aa15.95■□□□□ 0.14
CHD3-206ENST00000452447 OTOFQ9HC10 1997 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 MAP3K9P80192 1104 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
CHD3-206ENST00000452447 CTU1Q7Z7A3 348 aaKnown RBP15.94■□□□□ 0.14
CHD3-206ENST00000452447 IFNL1Q8IU54 200 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 XAGE2Q96GT9 111 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 ELP3Q9H9T3 547 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 CSADQ9Y600 493 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 MYH2Q9UKX2 1941 aa15.94■□□□□ 0.14
CHD3-206ENST00000452447 PNMA6EA0A0J9YXQ4 647 aa15.93■□□□□ 0.14
CHD3-206ENST00000452447 GPR25O00155 361 aa15.93■□□□□ 0.14
CHD3-206ENST00000452447 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
CHD3-206ENST00000452447 GORABQ5T7V8 394 aa15.93■□□□□ 0.14
CHD3-206ENST00000452447 OTUD7BQ6GQQ9 843 aa15.93■□□□□ 0.14
CHD3-206ENST00000452447 OPTNQ96CV9 577 aa15.93■□□□□ 0.14
CHD3-206ENST00000452447 ABCF2Q9UG63 623 aa15.93■□□□□ 0.14
CHD3-206ENST00000452447 DAGLAQ9Y4D2 1042 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms