RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TICAM2Q86XR7 235 aa14.07□□□□□ -0.16
SCN9A-204ENST00000452182 ANTXR1Q9H6X2 564 aa14.07□□□□□ -0.16
SCN9A-204ENST00000452182 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
SCN9A-204ENST00000452182 MAST2Q6P0Q8 1798 aa14.06□□□□□ -0.16
SCN9A-204ENST00000452182 TBC1D9Q6ZT07 1266 aa14.06□□□□□ -0.16
SCN9A-204ENST00000452182 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
SCN9A-204ENST00000452182 EVI5LQ96CN4 794 aa14.06□□□□□ -0.16
SCN9A-204ENST00000452182 ABCF2Q9UG63 623 aa14.06□□□□□ -0.16
SCN9A-204ENST00000452182 LDHBP07195 334 aaKnown RBP14.05□□□□□ -0.16
SCN9A-204ENST00000452182 PRDX5P30044 214 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 RGS3P49796 1198 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
SCN9A-204ENST00000452182 MXD3Q9BW11 206 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 MRIQ9BWK5 157 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 PIH1D3Q9NQM4 214 aaKnown RBP14.05□□□□□ -0.16
SCN9A-204ENST00000452182 LRP2BPQ9P2M1 347 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 GJA3Q9Y6H8 435 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 MYH7P12883 1935 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 AK9Q5TCS8 1911 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 MAST3O60307 1309 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 WDR90Q96KV7 1748 aa14.05□□□□□ -0.16
SCN9A-204ENST00000452182 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 GSPT1P15170 499 aaKnown RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 GMPSP49915 693 aaPredicted RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 HDLBPQ00341 1268 aaKnown RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 CNTROBQ8N137 903 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 SCN4AP35499 1836 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 USP17L8P0C7I0 530 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 SCNN1DP51172 638 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 GRIK5Q16478 980 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 KIAA0825Q8IV33 1275 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 NSUN4Q96CB9 384 aaKnown RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 GPRC5DQ9NZD1 345 aa14.04□□□□□ -0.16
SCN9A-204ENST00000452182 TTF2Q9UNY4 1162 aaKnown RBP14.04□□□□□ -0.16
SCN9A-204ENST00000452182 RFX7Q2KHR2 1363 aa14.03□□□□□ -0.16
SCN9A-204ENST00000452182 IDH1O75874 414 aaKnown RBP14.03□□□□□ -0.16
SCN9A-204ENST00000452182 ZNF280AP59817 542 aaPredicted RBP14.03□□□□□ -0.16
SCN9A-204ENST00000452182 MECOMQ03112 1051 aa14.03□□□□□ -0.16
SCN9A-204ENST00000452182 LRRFIP1Q32MZ4 808 aaKnown RBP14.03□□□□□ -0.16
SCN9A-204ENST00000452182 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
SCN9A-204ENST00000452182 RAI14Q9P0K7 980 aa14.03□□□□□ -0.16
SCN9A-204ENST00000452182 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
SCN9A-204ENST00000452182 TRIM6-TRIM34B2RNG4 842 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.16
SCN9A-204ENST00000452182 GSTO1P78417 241 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 ZSCAN25Q6NSZ9 544 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.16
SCN9A-204ENST00000452182 SLF2Q8IX21 1173 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 SPOCK2Q92563 424 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 FAM163AQ96GL9 167 aaPredicted RBP14.02□□□□□ -0.16
SCN9A-204ENST00000452182 SERPINA10Q9UK55 444 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 MYH2Q9UKX2 1941 aa14.02□□□□□ -0.16
SCN9A-204ENST00000452182 ZFYP08048 801 aaPredicted RBP14.01□□□□□ -0.17
SCN9A-204ENST00000452182 SDSP20132 328 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 MTMR14Q8NCE2 650 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 CNOT7Q9UIV1 285 aaKnown RBP14.01□□□□□ -0.17
SCN9A-204ENST00000452182 IQCA1LA6NCM1 817 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 F8W031 263 aaPredicted RBP14.01□□□□□ -0.17
SCN9A-204ENST00000452182 H7C1D1 291 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 GAKO14976 1311 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 LDHCP07864 332 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 PDE6AP16499 860 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 LMOD1P29536 600 aaPredicted RBP14.01□□□□□ -0.17
SCN9A-204ENST00000452182 ADD2P35612 726 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 UBE3CQ15386 1083 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 SLC9C2Q5TAH2 1124 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 MICALL2Q8IY33 904 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 TEKT1Q969V4 418 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 RILPL2Q969X0 211 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 FSD1Q9BTV5 496 aa14.01□□□□□ -0.17
SCN9A-204ENST00000452182 TCRBV5S4A2TA0A5A2 114 aa14□□□□□ -0.17
SCN9A-204ENST00000452182 CRKP46108 304 aa14□□□□□ -0.17
SCN9A-204ENST00000452182 NAA16Q6N069 864 aaPredicted RBP14□□□□□ -0.17
SCN9A-204ENST00000452182 MAGEB6Q8N7X4 407 aa14□□□□□ -0.17
SCN9A-204ENST00000452182 ZDHHC15Q96MV8 337 aa14□□□□□ -0.17
SCN9A-204ENST00000452182 MROH7-TTC4A0A0A0MT08 1334 aa13.99□□□□□ -0.17
SCN9A-204ENST00000452182 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
SCN9A-204ENST00000452182 DIXDC1Q155Q3 683 aa13.99□□□□□ -0.17
SCN9A-204ENST00000452182 ZBED3Q96IU2 234 aaPredicted RBP13.99□□□□□ -0.17
SCN9A-204ENST00000452182 MYOZ2Q9NPC6 264 aa13.99□□□□□ -0.17
SCN9A-204ENST00000452182 HACL1Q9UJ83 578 aa13.99□□□□□ -0.17
SCN9A-204ENST00000452182 ADAMTSL1Q8N6G6 1762 aa13.99□□□□□ -0.17
SCN9A-204ENST00000452182 ECM29Q5VYK3 1845 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 ZNF532Q9HCE3 1301 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 POTECB2RU33 542 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 HIP1O00291 1037 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 EPS15P42566 896 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 CERS3Q8IU89 383 aa13.98□□□□□ -0.17
SCN9A-204ENST00000452182 ADARB2Q9NS39 739 aaKnown RBP13.98□□□□□ -0.17
SCN9A-204ENST00000452182 DAGLAQ9Y4D2 1042 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms