RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ANKRD13AQ8IZ07 590 aa13.73□□□□□ -0.21
USP1-204ENST00000452143 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
USP1-204ENST00000452143 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
USP1-204ENST00000452143 TTF2Q9UNY4 1162 aaKnown RBP13.73□□□□□ -0.21
USP1-204ENST00000452143 CENPFP49454 3210 aa13.73□□□□□ -0.21
USP1-204ENST00000452143 PTPRCP08575 1304 aa13.72□□□□□ -0.21
USP1-204ENST00000452143 NBPF7P0C2Y1 421 aaPredicted RBP13.72□□□□□ -0.21
USP1-204ENST00000452143 GYG1P46976 350 aa13.72□□□□□ -0.21
USP1-204ENST00000452143 NBPF12Q5TAG4 269 aaPredicted RBP13.72□□□□□ -0.21
USP1-204ENST00000452143 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
USP1-204ENST00000452143 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
USP1-204ENST00000452143 FAM84BQ96KN1 310 aaPredicted RBP13.72□□□□□ -0.21
USP1-204ENST00000452143 BICC1Q9H694 974 aaKnown RBP13.72□□□□□ -0.21
USP1-204ENST00000452143 RIPOR2Q9Y4F9 1068 aa13.72□□□□□ -0.21
USP1-204ENST00000452143 AOX1Q06278 1338 aa13.71□□□□□ -0.21
USP1-204ENST00000452143 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP1-204ENST00000452143 TNNI2P48788 182 aa13.71□□□□□ -0.21
USP1-204ENST00000452143 OTUD7BQ6GQQ9 843 aa13.71□□□□□ -0.21
USP1-204ENST00000452143 TBC1D22AQ8WUA7 517 aa13.71□□□□□ -0.21
USP1-204ENST00000452143 PUS3Q9BZE2 481 aaKnown RBP13.71□□□□□ -0.21
USP1-204ENST00000452143 R3HDMLQ9H3Y0 253 aa13.71□□□□□ -0.21
USP1-204ENST00000452143 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
USP1-204ENST00000452143 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.21
USP1-204ENST00000452143 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
USP1-204ENST00000452143 USP2O75604 605 aaPredicted RBP13.7□□□□□ -0.22
USP1-204ENST00000452143 HDLBPQ00341 1268 aaKnown RBP13.7□□□□□ -0.22
USP1-204ENST00000452143 CAVIN4Q5BKX8 364 aa13.7□□□□□ -0.22
USP1-204ENST00000452143 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
USP1-204ENST00000452143 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
USP1-204ENST00000452143 DZIP1LQ8IYY4 767 aaKnown RBP13.7□□□□□ -0.22
USP1-204ENST00000452143 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
USP1-204ENST00000452143 PDE8BO95263 885 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 CRKP46108 304 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 METTL24Q5JXM2 366 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 FBXO33Q7Z6M2 555 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 VGLL2Q8N8G2 317 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 TEPSINQ96N21 525 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
USP1-204ENST00000452143 BRCA2P51587 3418 aa13.69□□□□□ -0.22
USP1-204ENST00000452143 MAST3O60307 1309 aa13.68□□□□□ -0.22
USP1-204ENST00000452143 GJA5P36382 358 aa13.68□□□□□ -0.22
USP1-204ENST00000452143 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
USP1-204ENST00000452143 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
USP1-204ENST00000452143 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
USP1-204ENST00000452143 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
USP1-204ENST00000452143 TRIM17Q9Y577 477 aa13.68□□□□□ -0.22
USP1-204ENST00000452143 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
USP1-204ENST00000452143 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
USP1-204ENST00000452143 E9PSI1 815 aa13.67□□□□□ -0.22
USP1-204ENST00000452143 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
USP1-204ENST00000452143 CRHR2Q13324 411 aa13.67□□□□□ -0.22
USP1-204ENST00000452143 LRRC24Q50LG9 513 aa13.67□□□□□ -0.22
USP1-204ENST00000452143 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
USP1-204ENST00000452143 TEKT1Q969V4 418 aa13.67□□□□□ -0.22
USP1-204ENST00000452143 ELP3Q9H9T3 547 aa13.67□□□□□ -0.22
USP1-204ENST00000452143 MKI67P46013 3256 aaKnown RBP13.66□□□□□ -0.22
USP1-204ENST00000452143 TCP10L2B9ZVM9 353 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 VGLL4Q14135 290 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 PUM3Q15397 648 aaKnown RBP13.66□□□□□ -0.22
USP1-204ENST00000452143 FKBP1CQ5VVH2 108 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
USP1-204ENST00000452143 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP1-204ENST00000452143 HOOK2Q96ED9 719 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 ZDHHC15Q96MV8 337 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 PTPN18Q99952 460 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 MRIQ9BWK5 157 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 TMOD2Q9NZR1 351 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
USP1-204ENST00000452143 CSADQ9Y600 493 aa13.66□□□□□ -0.22
USP1-204ENST00000452143 ZBTB22O15209 634 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 IFIT1P09914 478 aaKnown RBP13.65□□□□□ -0.22
USP1-204ENST00000452143 GTF2A2P52657 109 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 CHAF1AQ13111 956 aaPredicted RBP13.65□□□□□ -0.22
USP1-204ENST00000452143 GRIK5Q16478 980 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 FAM83AQ86UY5 434 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
USP1-204ENST00000452143 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
USP1-204ENST00000452143 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
USP1-204ENST00000452143 FGFR2P21802 821 aa13.64□□□□□ -0.23
USP1-204ENST00000452143 SP3Q02447 781 aa13.64□□□□□ -0.23
USP1-204ENST00000452143 ALDH1L2Q3SY69 923 aa13.64□□□□□ -0.23
USP1-204ENST00000452143 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
USP1-204ENST00000452143 PTPN22Q9Y2R2 807 aa13.64□□□□□ -0.23
USP1-204ENST00000452143 CCL15-CCL14A0A0B4J2E2 113 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 BCAMP50895 628 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 ARHGEF6Q15052 776 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 CCL15Q16663 113 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 BRI3BPQ8WY22 251 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 ARMC5Q96C12 935 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 EFCC1Q9HA90 598 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms