RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 ACBD3Q9H3P7 528 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 ZFYVE1Q9HBF4 777 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 TMEM39AQ9NV64 488 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 TLR6Q9Y2C9 796 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 MINDY4BA8MYZ0 360 aa6.44□□□□□ -1.38
VPS8-211ENST00000452140 K7ELQ4 463 aaPredicted RBP6.44□□□□□ -1.38
VPS8-211ENST00000452140 TNNI2P48788 182 aa6.44□□□□□ -1.38
VPS8-211ENST00000452140 GSTM4Q03013 218 aa6.44□□□□□ -1.38
VPS8-211ENST00000452140 RASIP1Q5U651 963 aa6.44□□□□□ -1.38
VPS8-211ENST00000452140 PCNX4Q63HM2 1172 aa6.44□□□□□ -1.38
VPS8-211ENST00000452140 ANKRD24Q8TF21 1146 aa6.44□□□□□ -1.38
VPS8-211ENST00000452140 DDX41Q9UJV9 622 aaKnown RBP6.44□□□□□ -1.38
VPS8-211ENST00000452140 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 FSCN2O14926 492 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 GBP2P32456 591 aaPredicted RBP6.43□□□□□ -1.38
VPS8-211ENST00000452140 LIG3P49916 1009 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 PPP2R3AQ06190 1150 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 TTBK2Q6IQ55 1244 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 SULF2Q8IWU5 870 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 CCSER2Q9H7U1 834 aa6.43□□□□□ -1.38
VPS8-211ENST00000452140 SRA1Q9HD15 236 aaKnown RBP6.43□□□□□ -1.38
VPS8-211ENST00000452140 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.43□□□□□ -1.38
VPS8-211ENST00000452140 GNB5O14775 395 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 ECEL1O95672 775 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 FAM160A1Q05DH4 1040 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 FAM117BQ6P1L5 589 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 GALNT11Q8NCW6 608 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 TRIM11Q96F44 468 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 PRDM6Q9NQX0 595 aa6.42□□□□□ -1.38
VPS8-211ENST00000452140 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 DDX3YO15523 660 aaKnown RBP6.41□□□□□ -1.38
VPS8-211ENST00000452140 DEAF1O75398 565 aaPredicted RBP6.41□□□□□ -1.38
VPS8-211ENST00000452140 TFE3P19532 575 aaPredicted RBP6.41□□□□□ -1.38
VPS8-211ENST00000452140 COL8A1P27658 744 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 NLRP12P59046 1061 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 ZC3H6P61129 1189 aaKnown RBP6.41□□□□□ -1.38
VPS8-211ENST00000452140 PIP4K2BP78356 416 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 C19orf57Q0VDD7 668 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 SETDB1Q15047 1291 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 NAALADL2Q58DX5 795 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 TRAPPC3LQ5T215 181 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 XP32Q5T750 250 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 RELL1Q8IUW5 271 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 ZNF654Q8IZM8 581 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 PHC3Q8NDX5 983 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 GRIN3AQ8TCU5 1115 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 KLHDC7BQ96G42 594 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 TMEM74Q96NL1 305 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 RSRP1Q9BUV0 290 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
VPS8-211ENST00000452140 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
VPS8-211ENST00000452140 PCDHB5Q9Y5E4 795 aa6.41□□□□□ -1.38
VPS8-211ENST00000452140 PF4P02776 101 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 BMP6P22004 513 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 NME2P22392 152 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 ARL4DP49703 201 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 MPRIPQ6WCQ1 1025 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 RHOVQ96L33 236 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 USP26Q9BXU7 913 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 ADAMTS1Q9UHI8 967 aa6.4□□□□□ -1.38
VPS8-211ENST00000452140 TM4SF5O14894 197 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 ADAM11O75078 769 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 CTSBP07858 339 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 SEPT6Q14141 434 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 MAP1SQ66K74 1059 aaPredicted RBP6.39□□□□□ -1.39
VPS8-211ENST00000452140 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 PLVAPQ9BX97 442 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
VPS8-211ENST00000452140 A0A0A0MRY4 1105 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 GSTP1P09211 210 aaKnown RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 RLBP1P12271 317 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 LMNB1P20700 586 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 MAOBP27338 520 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 ARNTP27540 789 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 EIF4A3P38919 411 aaKnown RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 PAK2Q13177 524 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 CAMK2GQ13555 558 aaPredicted RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 PWP1Q13610 501 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 POU4F3Q15319 338 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 FOXD4L6Q3SYB3 417 aaPredicted RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 SNAP47Q5SQN1 464 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 LLGL2Q6P1M3 1020 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 FBXL19Q6PCT2 694 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 FOXD4L3Q6VB84 417 aaPredicted RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 PDZD3Q86UT5 571 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 DDX54Q8TDD1 881 aaKnown RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 KCNB2Q92953 911 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 NRSN2Q9GZP1 204 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 SOX17Q9H6I2 414 aaPredicted RBP6.38□□□□□ -1.39
VPS8-211ENST00000452140 OSGEPQ9NPF4 335 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 INPP5FQ9Y2H2 1132 aa6.38□□□□□ -1.39
VPS8-211ENST00000452140 SAMM50Q9Y512 469 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms