RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 DEFB129Q9H1M3 183 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 TDRD3Q9H7E2 651 aaKnown RBP12.03□□□□□ -0.48
USP54-207ENST00000451492 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 TCP10L2B9ZVM9 353 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 IL15P40933 162 aaPredicted RBP12.02□□□□□ -0.49
USP54-207ENST00000451492 CACNB3P54284 484 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 KIF23Q02241 960 aaPredicted RBP12.02□□□□□ -0.49
USP54-207ENST00000451492 TFCP2Q12800 502 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 DZIP1LQ8IYY4 767 aaKnown RBP12.02□□□□□ -0.49
USP54-207ENST00000451492 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 TBC1D22AQ8WUA7 517 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 CCDC102AQ96A19 550 aa12.02□□□□□ -0.49
USP54-207ENST00000451492 ANGEL1Q9UNK9 670 aaKnown RBP12.02□□□□□ -0.49
USP54-207ENST00000451492 RLBP1P12271 317 aa12.01□□□□□ -0.49
USP54-207ENST00000451492 PHKA1P46020 1223 aa12.01□□□□□ -0.49
USP54-207ENST00000451492 FKBP1BP68106 108 aa12.01□□□□□ -0.49
USP54-207ENST00000451492 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
USP54-207ENST00000451492 ZNF70Q9UC06 446 aaPredicted RBP12.01□□□□□ -0.49
USP54-207ENST00000451492 SERPINA10Q9UK55 444 aa12.01□□□□□ -0.49
USP54-207ENST00000451492 DOCK2Q92608 1830 aa12.01□□□□□ -0.49
USP54-207ENST00000451492 MYO5AQ9Y4I1 1855 aaKnown RBP12.01□□□□□ -0.49
USP54-207ENST00000451492 LAMB1P07942 1786 aa12□□□□□ -0.49
USP54-207ENST00000451492 TIMM10P62072 90 aa12□□□□□ -0.49
USP54-207ENST00000451492 RASA3Q14644 834 aa12□□□□□ -0.49
USP54-207ENST00000451492 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
USP54-207ENST00000451492 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
USP54-207ENST00000451492 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
USP54-207ENST00000451492 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
USP54-207ENST00000451492 TEKT1Q969V4 418 aa12□□□□□ -0.49
USP54-207ENST00000451492 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
USP54-207ENST00000451492 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
USP54-207ENST00000451492 FBXO3Q9UK99 471 aa12□□□□□ -0.49
USP54-207ENST00000451492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
USP54-207ENST00000451492 MAST2Q6P0Q8 1798 aa12□□□□□ -0.49
USP54-207ENST00000451492 A0A1B0GUL7 405 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 TRPA1O75762 1119 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 PRDX5P30044 214 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 OS9Q13438 667 aaPredicted RBP11.99□□□□□ -0.49
USP54-207ENST00000451492 MTX1Q13505 466 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 CCDC102BQ68D86 513 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 TMEM39BQ9GZU3 492 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 GNL3LQ9NVN8 582 aaKnown RBP11.99□□□□□ -0.49
USP54-207ENST00000451492 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 MAST3O60307 1309 aa11.99□□□□□ -0.49
USP54-207ENST00000451492 TNNI2P48788 182 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP54-207ENST00000451492 TNFAIP1Q13829 316 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 DIXDC1Q155Q3 683 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 XAGE2Q96GT9 111 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
USP54-207ENST00000451492 CA12O43570 354 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 PPP1R12BO60237 982 aaPredicted RBP11.97□□□□□ -0.49
USP54-207ENST00000451492 LDHBP07195 334 aaKnown RBP11.97□□□□□ -0.49
USP54-207ENST00000451492 RASGRF1Q13972 1273 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 GORABQ5T7V8 394 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 CSRNP1Q96S65 589 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 ABCF2Q9UG63 623 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 DENND2AQ9ULE3 1009 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 AKAP2Q9Y2D5 859 aa11.97□□□□□ -0.49
USP54-207ENST00000451492 CDK5RAP2Q96SN8 1893 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 PI16Q6UXB8 463 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 RNF186Q9NXI6 227 aa11.96□□□□□ -0.49
USP54-207ENST00000451492 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
USP54-207ENST00000451492 IREB2P48200 963 aaKnown RBP11.95□□□□□ -0.5
USP54-207ENST00000451492 MVPQ14764 893 aaKnown RBP11.95□□□□□ -0.5
USP54-207ENST00000451492 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
USP54-207ENST00000451492 DZIP1Q86YF9 867 aaKnown RBP11.95□□□□□ -0.5
USP54-207ENST00000451492 SLC10A4Q96EP9 437 aa11.95□□□□□ -0.5
USP54-207ENST00000451492 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
USP54-207ENST00000451492 SEMA3EO15041 775 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
USP54-207ENST00000451492 USP2O75604 605 aaPredicted RBP11.94□□□□□ -0.5
USP54-207ENST00000451492 ATP8B2P98198 1209 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 HDLBPQ00341 1268 aaKnown RBP11.94□□□□□ -0.5
USP54-207ENST00000451492 TCP10Q12799 353 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 POLA2Q14181 598 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 LDLRAD1Q5T700 205 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 WNK4Q96J92 1243 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 TEPSINQ96N21 525 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 SUGT1Q9Y2Z0 365 aa11.94□□□□□ -0.5
USP54-207ENST00000451492 ATAD5Q96QE3 1844 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 SALL1Q9NSC2 1324 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 MAP3K11Q16584 847 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 TTC39AQ5SRH9 613 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 SPRYD7Q5W111 196 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 CDC42EP5Q6NZY7 148 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 CEP85Q6P2H3 762 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 HHIPL2Q6UWX4 724 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 ANKRD13AQ8IZ07 590 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms