RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 LPIN2Q92539 896 aa21.14■□□□□ 0.97
PRPF40A-204ENST00000450303 ARAP2Q8WZ64 1704 aa21.14■□□□□ 0.97
PRPF40A-204ENST00000450303 ATP2B3Q16720 1220 aa21.13■□□□□ 0.97
PRPF40A-204ENST00000450303 RASAL3Q86YV0 1011 aa21.13■□□□□ 0.97
PRPF40A-204ENST00000450303 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
PRPF40A-204ENST00000450303 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.13■□□□□ 0.97
PRPF40A-204ENST00000450303 DDX19BQ9UMR2 479 aa21.13■□□□□ 0.97
PRPF40A-204ENST00000450303 MYH13Q9UKX3 1938 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 SRGAP3O43295 1099 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 RLBP1P12271 317 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 CRKP46108 304 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 C20orf194Q5TEA3 1177 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 COPRSQ9NQ92 184 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 SERPINA10Q9UK55 444 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 FBXO3Q9UK99 471 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 COG6Q9Y2V7 657 aa21.12■□□□□ 0.97
PRPF40A-204ENST00000450303 IL15P40933 162 aaPredicted RBP21.11■□□□□ 0.97
PRPF40A-204ENST00000450303 TBC1D22AQ8WUA7 517 aa21.11■□□□□ 0.97
PRPF40A-204ENST00000450303 ZNF70Q9UC06 446 aaPredicted RBP21.11■□□□□ 0.97
PRPF40A-204ENST00000450303 ANGEL1Q9UNK9 670 aaKnown RBP21.11■□□□□ 0.97
PRPF40A-204ENST00000450303 CASP8AP2Q9UKL3 1982 aa21.1■□□□□ 0.97
PRPF40A-204ENST00000450303 ARMC9Q7Z3E5 817 aa21.1■□□□□ 0.97
PRPF40A-204ENST00000450303 CSRNP1Q96S65 589 aa21.1■□□□□ 0.97
PRPF40A-204ENST00000450303 AKAP11Q9UKA4 1901 aa21.1■□□□□ 0.97
PRPF40A-204ENST00000450303 CA12O43570 354 aa21.09■□□□□ 0.97
PRPF40A-204ENST00000450303 GNAI2P04899 355 aa21.09■□□□□ 0.97
PRPF40A-204ENST00000450303 MKRN3Q13064 507 aaKnown RBP21.09■□□□□ 0.97
PRPF40A-204ENST00000450303 RASA3Q14644 834 aa21.09■□□□□ 0.97
PRPF40A-204ENST00000450303 NBPF12Q5TAG4 269 aaPredicted RBP21.09■□□□□ 0.97
PRPF40A-204ENST00000450303 COL1A1P02452 1464 aaPredicted RBP21.08■□□□□ 0.97
PRPF40A-204ENST00000450303 ADORA1P30542 326 aa21.08■□□□□ 0.97
PRPF40A-204ENST00000450303 TIMM10P62072 90 aa21.08■□□□□ 0.97
PRPF40A-204ENST00000450303 SPDYE2Q495Y8 402 aa21.08■□□□□ 0.97
PRPF40A-204ENST00000450303 CRBNQ96SW2 442 aa21.08■□□□□ 0.97
PRPF40A-204ENST00000450303 PPP2R3BQ9Y5P8 575 aa21.08■□□□□ 0.97
PRPF40A-204ENST00000450303 SSC5DA1L4H1 1573 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 TCP10L2B9ZVM9 353 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 TRPA1O75762 1119 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 PHKA1P46020 1223 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 IRX6P78412 446 aaPredicted RBP21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 TFCP2Q12800 502 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 MTX1Q13505 466 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 AAMPQ13685 434 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 RNF186Q9NXI6 227 aa21.07■□□□□ 0.96
PRPF40A-204ENST00000450303 PNMA6EA0A0J9YXQ4 647 aa21.06■□□□□ 0.96
PRPF40A-204ENST00000450303 CACNB3P54284 484 aa21.06■□□□□ 0.96
PRPF40A-204ENST00000450303 SUPT20HL1Q3ZLR7 823 aa21.06■□□□□ 0.96
PRPF40A-204ENST00000450303 TEKT1Q969V4 418 aa21.06■□□□□ 0.96
PRPF40A-204ENST00000450303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.06■□□□□ 0.96
PRPF40A-204ENST00000450303 HDLBPQ00341 1268 aaKnown RBP21.05■□□□□ 0.96
PRPF40A-204ENST00000450303 LDLRAD1Q5T700 205 aa21.05■□□□□ 0.96
PRPF40A-204ENST00000450303 ERICH6BQ5W0A0 696 aa21.05■□□□□ 0.96
PRPF40A-204ENST00000450303 CDAN1Q8IWY9 1227 aa21.05■□□□□ 0.96
PRPF40A-204ENST00000450303 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
PRPF40A-204ENST00000450303 GNL3LQ9NVN8 582 aaKnown RBP21.05■□□□□ 0.96
PRPF40A-204ENST00000450303 ZBTB7BO15156 539 aaPredicted RBP21.04■□□□□ 0.96
PRPF40A-204ENST00000450303 PPP1R12BO60237 982 aaPredicted RBP21.04■□□□□ 0.96
PRPF40A-204ENST00000450303 CLMNQ96JQ2 1002 aa21.04■□□□□ 0.96
PRPF40A-204ENST00000450303 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
PRPF40A-204ENST00000450303 A0A1B0GUL7 405 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 USP2O75604 605 aaPredicted RBP21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 TNFAIP1Q13829 316 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 CCDC102BQ68D86 513 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 SLC10A4Q96EP9 437 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 ZDHHC15Q96MV8 337 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 TMEM39BQ9GZU3 492 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 SUGT1Q9Y2Z0 365 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 MAST3O60307 1309 aa21.03■□□□□ 0.96
PRPF40A-204ENST00000450303 PRDX5P30044 214 aa21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 MAP3K11Q16584 847 aa21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 APOBEC3HQ6NTF7 200 aaKnown RBP21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 EXOC6Q8TAG9 804 aa21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 TEPSINQ96N21 525 aa21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 NEUROD6Q96NK8 337 aa21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 MRIQ9BWK5 157 aa21.02■□□□□ 0.96
PRPF40A-204ENST00000450303 TNNI2P48788 182 aa21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 G3BP1Q13283 466 aaKnown RBP eCLIP21.01■□□□□ 0.956e-8■□□□□ 11.3
PRPF40A-204ENST00000450303 DIXDC1Q155Q3 683 aa21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 REM2Q8IYK8 340 aaPredicted RBP21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 XAGE2Q96GT9 111 aa21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 SAGE1Q9NXZ1 904 aa21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 DENND2AQ9ULE3 1009 aa21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 AKAP2Q9Y2D5 859 aa21.01■□□□□ 0.95
PRPF40A-204ENST00000450303 LDHBP07195 334 aaKnown RBP21■□□□□ 0.95
PRPF40A-204ENST00000450303 IREB2P48200 963 aaKnown RBP21■□□□□ 0.95
PRPF40A-204ENST00000450303 SPRYD7Q5W111 196 aa21■□□□□ 0.95
PRPF40A-204ENST00000450303 HHIPL2Q6UWX4 724 aa21■□□□□ 0.95
PRPF40A-204ENST00000450303 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
PRPF40A-204ENST00000450303 TMOD2Q9NZR1 351 aa20.99■□□□□ 0.95
PRPF40A-204ENST00000450303 SEMA3EO15041 775 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 TBC1D8O95759 1140 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 TM4SF4P48230 202 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 RASGRF1Q13972 1273 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 ABHD8Q96I13 439 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 ZBTB40Q9NUA8 1239 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 DAGLAQ9Y4D2 1042 aa20.98■□□□□ 0.95
PRPF40A-204ENST00000450303 POLA2Q14181 598 aa20.97■□□□□ 0.95
PRPF40A-204ENST00000450303 WNK4Q96J92 1243 aa20.97■□□□□ 0.95
PRPF40A-204ENST00000450303 ABCF2Q9UG63 623 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms