RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, human

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBRM1-217	ENST00000450271	SLC10A4	Q96EP9	437 aa		32.83	■■■□□ 2.85
PBRM1-217	ENST00000450271	CLMN	Q96JQ2	1002 aa		32.83	■■■□□ 2.85
PBRM1-217	ENST00000450271	TBC1D8	O95759	1140 aa		32.82	■■■□□ 2.84
PBRM1-217	ENST00000450271	FBXO3	Q9UK99	471 aa		32.82	■■■□□ 2.84
PBRM1-217	ENST00000450271	USP2	O75604	605 aa	Predicted RBP	32.81	■■■□□ 2.84
PBRM1-217	ENST00000450271	LPIN2	Q92539	896 aa		32.81	■■■□□ 2.84
PBRM1-217	ENST00000450271	LRRFIP2	Q9Y608	721 aa	Known RBP	32.81	■■■□□ 2.84
PBRM1-217	ENST00000450271	CIAO1	O76071	339 aa		32.8	■■■□□ 2.84
PBRM1-217	ENST00000450271	SLC5A1	P13866	664 aa		32.8	■■■□□ 2.84
PBRM1-217	ENST00000450271	TEPSIN	Q96N21	525 aa		32.8	■■■□□ 2.84
PBRM1-217	ENST00000450271	ZBTB48	P10074	688 aa	Predicted RBP	32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	IREB2	P48200	963 aa	Known RBP	32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	CTU1	Q7Z7A3	348 aa	Known RBP	32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	ARHGAP45	Q92619	1136 aa		32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	WNK4	Q96J92	1243 aa		32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	MRI	Q9BWK5	157 aa		32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	CFHR5	Q9BXR6	569 aa		32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	SUGT1	Q9Y2Z0	365 aa		32.79	■■■□□ 2.84
PBRM1-217	ENST00000450271	RGS19	P49795	217 aa		32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	NOM1	Q5C9Z4	860 aa	Known RBP	32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	CDAN1	Q8IWY9	1227 aa		32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	ZNF296	Q8WUU4	475 aa	Predicted RBP	32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	TEKT1	Q969V4	418 aa		32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	MEIS3	Q99687	375 aa		32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	SIL1	Q9H173	461 aa		32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	HDAC5	Q9UQL6	1122 aa		32.78	■■■□□ 2.84
PBRM1-217	ENST00000450271	MANSC4	A6NHS7	340 aa	Predicted RBP	32.77	■■■□□ 2.84
PBRM1-217	ENST00000450271	TCP10L2	B9ZVM9	353 aa		32.77	■■■□□ 2.84
PBRM1-217	ENST00000450271	INTS3	Q68E01	1043 aa	Known RBP	32.76	■■■□□ 2.83
PBRM1-217	ENST00000450271	ZDHHC15	Q96MV8	337 aa		32.76	■■■□□ 2.83
PBRM1-217	ENST00000450271	TMEM39B	Q9GZU3	492 aa		32.76	■■■□□ 2.83
PBRM1-217	ENST00000450271	GPR25	O00155	361 aa		32.75	■■■□□ 2.83
PBRM1-217	ENST00000450271	ANKRD13A	Q8IZ07	590 aa		32.75	■■■□□ 2.83
PBRM1-217	ENST00000450271	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.75	■■■□□ 2.83
PBRM1-217	ENST00000450271	CEP126	Q9P2H0	1117 aa		32.75	■■■□□ 2.83
PBRM1-217	ENST00000450271	MAST3	O60307	1309 aa		32.75	■■■□□ 2.83
PBRM1-217	ENST00000450271	GJA5	P36382	358 aa		32.74	■■■□□ 2.83
PBRM1-217	ENST00000450271	TNNI2	P48788	182 aa		32.74	■■■□□ 2.83
PBRM1-217	ENST00000450271	INHBE	P58166	350 aa		32.74	■■■□□ 2.83
PBRM1-217	ENST00000450271	ATP2B3	Q16720	1220 aa		32.74	■■■□□ 2.83
PBRM1-217	ENST00000450271	R3HDML	Q9H3Y0	253 aa		32.74	■■■□□ 2.83
PBRM1-217	ENST00000450271	PA2G4	Q9UQ80	394 aa	Known RBP	32.74	■■■□□ 2.83
PBRM1-217	ENST00000450271	APOBEC3H	Q6NTF7	200 aa	Known RBP	32.73	■■■□□ 2.83
PBRM1-217	ENST00000450271	IFNL1	Q8IU54	200 aa		32.73	■■■□□ 2.83
PBRM1-217	ENST00000450271	WDR66	Q8TBY9	1149 aa		32.73	■■■□□ 2.83
PBRM1-217	ENST00000450271	COPRS	Q9NQ92	184 aa		32.73	■■■□□ 2.83
PBRM1-217	ENST00000450271	LAMB1	P07942	1786 aa		32.73	■■■□□ 2.83
PBRM1-217	ENST00000450271	ALDH1A1	P00352	501 aa		32.72	■■■□□ 2.83
PBRM1-217	ENST00000450271	IL15	P40933	162 aa	Predicted RBP	32.72	■■■□□ 2.83
PBRM1-217	ENST00000450271	OTOF	Q9HC10	1997 aa		32.71	■■■□□ 2.83
PBRM1-217	ENST00000450271	CACNB3	P54284	484 aa		32.71	■■■□□ 2.83
PBRM1-217	ENST00000450271	HHIPL2	Q6UWX4	724 aa		32.71	■■■□□ 2.83
PBRM1-217	ENST00000450271	IGF2BP3	O00425	579 aa	Known RBP eCLIP	32.69	■■■□□ 2.82
PBRM1-217	ENST00000450271	FKBP1C	Q5VVH2	108 aa		32.69	■■■□□ 2.82
PBRM1-217	ENST00000450271	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.69	■■■□□ 2.82
PBRM1-217	ENST00000450271	GNAI3	P08754	354 aa		32.68	■■■□□ 2.82
PBRM1-217	ENST00000450271	FAM83A	Q86UY5	434 aa		32.68	■■■□□ 2.82
PBRM1-217	ENST00000450271	MYH13	Q9UKX3	1938 aa		32.68	■■■□□ 2.82
PBRM1-217	ENST00000450271	TRIM27	P14373	513 aa		32.67	■■■□□ 2.82
PBRM1-217	ENST00000450271	PKN2	Q16513	984 aa	Known RBP	32.67	■■■□□ 2.82
PBRM1-217	ENST00000450271	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
PBRM1-217	ENST00000450271	ELP3	Q9H9T3	547 aa		32.67	■■■□□ 2.82
PBRM1-217	ENST00000450271	TMOD2	Q9NZR1	351 aa		32.67	■■■□□ 2.82
PBRM1-217	ENST00000450271	ZBTB22	O15209	634 aa		32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	IPO8	O15397	1037 aa	Known RBP	32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	FKTN	O75072	461 aa		32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	MLLT1	Q03111	559 aa	Predicted RBP	32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	MTX1	Q13505	466 aa		32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	OPTN	Q96CV9	577 aa		32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	GNL3L	Q9NVN8	582 aa	Known RBP	32.66	■■■□□ 2.82
PBRM1-217	ENST00000450271	TESPA1	A2RU30	521 aa	Predicted RBP	32.65	■■■□□ 2.82
PBRM1-217	ENST00000450271	BCAR3	O75815	825 aa		32.65	■■■□□ 2.82
PBRM1-217	ENST00000450271	PHKA1	P46020	1223 aa		32.65	■■■□□ 2.82
PBRM1-217	ENST00000450271	MAP3K9	P80192	1104 aa		32.65	■■■□□ 2.82
PBRM1-217	ENST00000450271	ATF7IP	Q6VMQ6	1270 aa		32.65	■■■□□ 2.82
PBRM1-217	ENST00000450271	TNN	Q9UQP3	1299 aa		32.65	■■■□□ 2.82
PBRM1-217	ENST00000450271	PRDX5	P30044	214 aa		32.64	■■■□□ 2.82
PBRM1-217	ENST00000450271	VGLL4	Q14135	290 aa		32.64	■■■□□ 2.82
PBRM1-217	ENST00000450271	SALL1	Q9NSC2	1324 aa		32.64	■■■□□ 2.82
PBRM1-217	ENST00000450271	HPS5	Q9UPZ3	1129 aa		32.64	■■■□□ 2.82
PBRM1-217	ENST00000450271	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	SEMA3E	O15041	775 aa		32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	SRGAP3	O43295	1099 aa		32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	ADORA1	P30542	326 aa		32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	PTPN18	Q99952	460 aa		32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	DENND2A	Q9ULE3	1009 aa		32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	DAGLA	Q9Y4D2	1042 aa		32.63	■■■□□ 2.81
PBRM1-217	ENST00000450271	DIXDC1	Q155Q3	683 aa		32.62	■■■□□ 2.81
PBRM1-217	ENST00000450271	CNKSR2	Q8WXI2	1034 aa		32.62	■■■□□ 2.81
PBRM1-217	ENST00000450271	MS4A4A	Q96JQ5	239 aa		32.62	■■■□□ 2.81
PBRM1-217	ENST00000450271	CCDC102B	Q68D86	513 aa		32.61	■■■□□ 2.81
PBRM1-217	ENST00000450271	FRAT1	Q92837	279 aa	Predicted RBP	32.61	■■■□□ 2.81
PBRM1-217	ENST00000450271	LDHB	P07195	334 aa	Known RBP	32.6	■■■□□ 2.81
PBRM1-217	ENST00000450271	OTUD7B	Q6GQQ9	843 aa		32.6	■■■□□ 2.81
PBRM1-217	ENST00000450271	CSAD	Q9Y600	493 aa		32.6	■■■□□ 2.81
PBRM1-217	ENST00000450271	MIER1	Q8N108	512 aa		32.59	■■■□□ 2.81
PBRM1-217	ENST00000450271	TIMM10	P62072	90 aa		32.58	■■■□□ 2.81
PBRM1-217	ENST00000450271	CDC42EP5	Q6NZY7	148 aa		32.58	■■■□□ 2.81
PBRM1-217	ENST00000450271	HOOK2	Q96ED9	719 aa		32.58	■■■□□ 2.81
PBRM1-217	ENST00000450271	SOX10	P56693	466 aa		32.57	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms