RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 HCLS1P14317 486 aaPredicted RBP10.48□□□□□ -0.73
LINC01961-201ENST00000449954 MYL6BP14649 208 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 CAPN2P17655 700 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 GPSM2P81274 684 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 NBR1Q14596 966 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 KIF22Q14807 665 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 SYMPKQ92797 1274 aaKnown RBP10.48□□□□□ -0.73
LINC01961-201ENST00000449954 GDF15Q99988 308 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 ZFYVE28Q9HCC9 887 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 RRP7AQ9Y3A4 280 aaKnown RBP10.48□□□□□ -0.73
LINC01961-201ENST00000449954 KNSTRNQ9Y448 316 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
LINC01961-201ENST00000449954 SH3TC1Q8TE82 1336 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 SSC5DA1L4H1 1573 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 USP17L3A6NCW0 530 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 USP17L4A6NCW7 530 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 WDHD1O75717 1129 aaPredicted RBP10.47□□□□□ -0.73
LINC01961-201ENST00000449954 TAF1CQ15572 869 aaPredicted RBP10.47□□□□□ -0.73
LINC01961-201ENST00000449954 HSP90AB3PQ58FF7 597 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 USP17L1Q7RTZ2 530 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 FAM122AQ96E09 287 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
LINC01961-201ENST00000449954 COL3A1P02461 1466 aaPredicted RBP10.47□□□□□ -0.73
LINC01961-201ENST00000449954 LAMA2P24043 3122 aaKnown RBP10.46□□□□□ -0.73
LINC01961-201ENST00000449954 PPP1R3GB7ZBB8 358 aa10.46□□□□□ -0.73
LINC01961-201ENST00000449954 U2SURPO15042 1029 aaKnown RBP10.46□□□□□ -0.73
LINC01961-201ENST00000449954 MTFR1Q15390 333 aa10.46□□□□□ -0.73
LINC01961-201ENST00000449954 TDHQ8IZJ6 230 aa10.46□□□□□ -0.73
LINC01961-201ENST00000449954 CELF1Q92879 486 aaKnown RBP10.46□□□□□ -0.73
LINC01961-201ENST00000449954 CLMNQ96JQ2 1002 aa10.46□□□□□ -0.73
LINC01961-201ENST00000449954 PTPN18Q99952 460 aa10.46□□□□□ -0.73
LINC01961-201ENST00000449954 TRMT112Q9UI30 125 aaKnown RBP10.46□□□□□ -0.73
LINC01961-201ENST00000449954 PPP2R3BQ9Y5P8 575 aa10.46□□□□□ -0.73
LINC01961-201ENST00000449954 UFL1O94874 794 aa10.45□□□□□ -0.74
LINC01961-201ENST00000449954 LACTBP83111 547 aaPredicted RBP10.45□□□□□ -0.74
LINC01961-201ENST00000449954 MCM10Q7L590 875 aa10.45□□□□□ -0.74
LINC01961-201ENST00000449954 PODNQ7Z5L7 613 aa10.45□□□□□ -0.74
LINC01961-201ENST00000449954 NLRP10Q86W26 655 aa10.45□□□□□ -0.74
LINC01961-201ENST00000449954 KCTD12Q96CX2 325 aaKnown RBP10.45□□□□□ -0.74
LINC01961-201ENST00000449954 GGA1Q9UJY5 639 aa10.45□□□□□ -0.74
LINC01961-201ENST00000449954 MAP3K7O43318 606 aa10.44□□□□□ -0.74
LINC01961-201ENST00000449954 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 CCL5P13501 91 aa10.44□□□□□ -0.74
LINC01961-201ENST00000449954 IREB2P48200 963 aaKnown RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 BCAMP50895 628 aa10.44□□□□□ -0.74
LINC01961-201ENST00000449954 UBXN2AP68543 259 aa10.44□□□□□ -0.74
LINC01961-201ENST00000449954 SF3B3Q15393 1217 aaKnown RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 FAM109BQ6ICB4 259 aaPredicted RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 PNISRQ8TF01 805 aaKnown RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 U2AF1L4Q8WU68 220 aaKnown RBP10.44□□□□□ -0.74
LINC01961-201ENST00000449954 RNF208Q9H0X6 261 aa10.44□□□□□ -0.74
LINC01961-201ENST00000449954 ANKIB1Q9P2G1 1089 aa10.44□□□□□ -0.74
LINC01961-201ENST00000449954 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 SASH1O94885 1247 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 GRK4P32298 578 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 GJA5P36382 358 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 PROX2Q3B8N5 592 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 ANKRD13AQ8IZ07 590 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
LINC01961-201ENST00000449954 DEFB129Q9H1M3 183 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 FZD1Q9UP38 647 aa10.43□□□□□ -0.74
LINC01961-201ENST00000449954 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
LINC01961-201ENST00000449954 TLR2O60603 784 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 HOXD10P28358 340 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 PRKAR2BP31323 418 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 SUPT20HL1Q3ZLR7 823 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 HELBQ8NG08 1087 aaPredicted RBP10.42□□□□□ -0.74
LINC01961-201ENST00000449954 RAET1EQ8TD07 263 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 PHACTR3Q96KR7 559 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 ARHGAP39Q9C0H5 1083 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 ZCCHC17Q9NP64 241 aaKnown RBP10.42□□□□□ -0.74
LINC01961-201ENST00000449954 SRRDQ9UH36 339 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 RIPOR2Q9Y4F9 1068 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
LINC01961-201ENST00000449954 COL4A1P02462 1669 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 FAM205AQ6ZU69 1335 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 IRS2Q9Y4H2 1338 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 CDH23Q9H251 3354 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 GTF2A2P52657 109 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 RPS8P62241 208 aaKnown RBP10.41□□□□□ -0.74
LINC01961-201ENST00000449954 DACT2Q5SW24 774 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 BRI3BPQ8WY22 251 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 OPTNQ96CV9 577 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 TRIM47Q96LD4 638 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 GUCD1Q96NT3 240 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 HCSTQ9UBK5 93 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 OTOFQ9HC10 1997 aa10.41□□□□□ -0.74
LINC01961-201ENST00000449954 XDHP47989 1333 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 CCL15-CCL14A0A0B4J2E2 113 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 TNFRSF10AO00220 468 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 SGPL1O95470 568 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 EIF4A1P60842 406 aaKnown RBP10.4□□□□□ -0.74
LINC01961-201ENST00000449954 CCL15Q16663 113 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
LINC01961-201ENST00000449954 STRIP1Q5VSL9 837 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms