RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 C7orf43Q8WVR3 580 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 TRPM7Q96QT4 1865 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
NPHP1-208ENST00000449600 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
NPHP1-208ENST00000449600 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
NPHP1-208ENST00000449600 PRPF40BQ6NWY9 871 aaKnown RBP10.26□□□□□ -0.77
NPHP1-208ENST00000449600 USP50Q70EL3 339 aaPredicted RBP10.26□□□□□ -0.77
NPHP1-208ENST00000449600 FMNL2Q96PY5 1086 aa10.26□□□□□ -0.77
NPHP1-208ENST00000449600 ZIC5Q96T25 663 aa10.26□□□□□ -0.77
NPHP1-208ENST00000449600 NXF1Q9UBU9 619 aaKnown RBP10.26□□□□□ -0.77
NPHP1-208ENST00000449600 PTPRCP08575 1304 aa10.26□□□□□ -0.77
NPHP1-208ENST00000449600 TCERG1O14776 1098 aaKnown RBP10.25□□□□□ -0.77
NPHP1-208ENST00000449600 EIF2S2P20042 333 aaKnown RBP10.25□□□□□ -0.77
NPHP1-208ENST00000449600 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
NPHP1-208ENST00000449600 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
NPHP1-208ENST00000449600 PTCRAQ6ISU1 281 aaPredicted RBP10.25□□□□□ -0.77
NPHP1-208ENST00000449600 ZNF790Q6PG37 636 aa10.25□□□□□ -0.77
NPHP1-208ENST00000449600 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
NPHP1-208ENST00000449600 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
NPHP1-208ENST00000449600 COL11A2P13942 1736 aaPredicted RBP10.24□□□□□ -0.77
NPHP1-208ENST00000449600 ANKRD31Q8N7Z5 1873 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 CELF2O95319 508 aaKnown RBP10.24□□□□□ -0.77
NPHP1-208ENST00000449600 SNRPA1P09661 255 aaKnown RBP10.24□□□□□ -0.77
NPHP1-208ENST00000449600 SRGNP10124 158 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 BMP1P13497 986 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
NPHP1-208ENST00000449600 CCDC93Q567U6 631 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 ITPRIPQ8IWB1 547 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 PANK1Q8TE04 598 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
NPHP1-208ENST00000449600 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 TJP1Q07157 1748 aa10.24□□□□□ -0.77
NPHP1-208ENST00000449600 IRF6O14896 467 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 PTCD1O75127 700 aaKnown RBP10.23□□□□□ -0.77
NPHP1-208ENST00000449600 TRIM27P14373 513 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 GMPRP36959 345 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 SCNN1DP51172 638 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 MVPQ14764 893 aaKnown RBP10.23□□□□□ -0.77
NPHP1-208ENST00000449600 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 ZNF277Q9NRM2 450 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-208ENST00000449600 RNF186Q9NXI6 227 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 DBF4Q9UBU7 674 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-208ENST00000449600 SCN11AQ9UI33 1791 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 ARFGEF2Q9Y6D5 1785 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 SLX4Q8IY92 1834 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 COL15A1P39059 1388 aa10.23□□□□□ -0.77
NPHP1-208ENST00000449600 RANBP2P49792 3224 aaKnown RBP10.23□□□□□ -0.77
NPHP1-208ENST00000449600 FAM155AB1AL88 458 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-208ENST00000449600 DDX58O95786 925 aaKnown RBP10.22□□□□□ -0.77
NPHP1-208ENST00000449600 LMOD1P29536 600 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-208ENST00000449600 SLC39A6Q13433 755 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-208ENST00000449600 PRR5LQ6MZQ0 368 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 BICDL1Q6ZP65 573 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 NPAS3Q8IXF0 933 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 RTKN2Q8IZC4 609 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 MASTLQ96GX5 879 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 TEX13AQ9BXU3 409 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-208ENST00000449600 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 PGAP2Q9UHJ9 254 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 MRC1P22897 1456 aa10.22□□□□□ -0.77
NPHP1-208ENST00000449600 KCNQ3O43525 872 aa10.21□□□□□ -0.77
NPHP1-208ENST00000449600 TRPA1O75762 1119 aa10.21□□□□□ -0.77
NPHP1-208ENST00000449600 IARSP41252 1262 aaKnown RBP10.21□□□□□ -0.77
NPHP1-208ENST00000449600 EPS15P42566 896 aa10.21□□□□□ -0.77
NPHP1-208ENST00000449600 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.77
NPHP1-208ENST00000449600 NUDT12Q9BQG2 462 aa10.21□□□□□ -0.77
NPHP1-208ENST00000449600 HTTP42858 3142 aa10.21□□□□□ -0.78
NPHP1-208ENST00000449600 CCT4P50991 539 aaKnown RBP10.2□□□□□ -0.78
NPHP1-208ENST00000449600 FLIIQ13045 1269 aa10.2□□□□□ -0.78
NPHP1-208ENST00000449600 BCORQ6W2J9 1755 aa10.2□□□□□ -0.78
NPHP1-208ENST00000449600 KDM3BQ7LBC6 1761 aa10.2□□□□□ -0.78
NPHP1-208ENST00000449600 NPM2Q86SE8 214 aaKnown RBP10.2□□□□□ -0.78
NPHP1-208ENST00000449600 TMEM57Q8N5G2 664 aa10.2□□□□□ -0.78
NPHP1-208ENST00000449600 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
NPHP1-208ENST00000449600 SNED1Q8TER0 1413 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 H3BM21 787 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
NPHP1-208ENST00000449600 STARD3NLO95772 234 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 CYP19A1P11511 503 aaPredicted RBP10.19□□□□□ -0.78
NPHP1-208ENST00000449600 FBXO46Q6PJ61 603 aaPredicted RBP10.19□□□□□ -0.78
NPHP1-208ENST00000449600 SLC4A10Q6U841 1118 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 RETREG3Q86VR2 466 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 EHBP1Q8NDI1 1231 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
NPHP1-208ENST00000449600 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 CHPF2Q9P2E5 772 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 HDAC5Q9UQL6 1122 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 BRCA2P51587 3418 aa10.19□□□□□ -0.78
NPHP1-208ENST00000449600 HEG1Q9ULI3 1381 aa10.18□□□□□ -0.78
NPHP1-208ENST00000449600 ABCC4O15439 1325 aa10.18□□□□□ -0.78
NPHP1-208ENST00000449600 RLBP1P12271 317 aa10.18□□□□□ -0.78
NPHP1-208ENST00000449600 EIF6P56537 245 aaKnown RBP10.18□□□□□ -0.78
NPHP1-208ENST00000449600 HUNKP57058 714 aa10.18□□□□□ -0.78
NPHP1-208ENST00000449600 SH3BP2P78314 561 aa10.18□□□□□ -0.78
NPHP1-208ENST00000449600 KIF23Q02241 960 aaPredicted RBP10.18□□□□□ -0.78
NPHP1-208ENST00000449600 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
NPHP1-208ENST00000449600 DNAJC10Q8IXB1 793 aa10.18□□□□□ -0.78
NPHP1-208ENST00000449600 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms