RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 ARHGEF6Q15052 776 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
PBRM1-216ENST00000449505 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
PBRM1-216ENST00000449505 TEKT1Q969V4 418 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 WNK4Q96J92 1243 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 SMC4Q9NTJ3 1288 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 JAG2Q9Y219 1238 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 CSADQ9Y600 493 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 OTOFQ9HC10 1997 aa8.64□□□□□ -1.03
PBRM1-216ENST00000449505 RPAP1Q9BWH6 1393 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-216ENST00000449505 PDE8BO95263 885 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 SLC5A1P13866 664 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 CRKP46108 304 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 SOX10P56693 466 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 IFNL1Q8IU54 200 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 DZIP1LQ8IYY4 767 aaKnown RBP8.63□□□□□ -1.03
PBRM1-216ENST00000449505 ERO1AQ96HE7 468 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-216ENST00000449505 PRMT6Q96LA8 375 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-216ENST00000449505 ZNF70Q9UC06 446 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-216ENST00000449505 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 RIPOR2Q9Y4F9 1068 aa8.63□□□□□ -1.03
PBRM1-216ENST00000449505 UBTFL1P0CB47 393 aaPredicted RBP8.62□□□□□ -1.03
PBRM1-216ENST00000449505 CHAF1AQ13111 956 aaPredicted RBP8.62□□□□□ -1.03
PBRM1-216ENST00000449505 NBPF12Q5TAG4 269 aaPredicted RBP8.62□□□□□ -1.03
PBRM1-216ENST00000449505 FKBP1CQ5VVH2 108 aa8.62□□□□□ -1.03
PBRM1-216ENST00000449505 DCAF15Q66K64 600 aa8.62□□□□□ -1.03
PBRM1-216ENST00000449505 ANKRD44Q8N8A2 993 aa8.62□□□□□ -1.03
PBRM1-216ENST00000449505 WDR66Q8TBY9 1149 aa8.62□□□□□ -1.03
PBRM1-216ENST00000449505 KAZALD1Q96I82 304 aa8.62□□□□□ -1.03
PBRM1-216ENST00000449505 API5Q9BZZ5 524 aaKnown RBP8.62□□□□□ -1.03
PBRM1-216ENST00000449505 GNL3LQ9NVN8 582 aaKnown RBP8.62□□□□□ -1.03
PBRM1-216ENST00000449505 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
PBRM1-216ENST00000449505 EYA2O00167 538 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 GTF2A2P52657 109 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
PBRM1-216ENST00000449505 FBXO33Q7Z6M2 555 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 FAM83AQ86UY5 434 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 VGLL2Q8N8G2 317 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 SSH1Q8WYL5 1049 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 LPIN2Q92539 896 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 CLMNQ96JQ2 1002 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 MRIQ9BWK5 157 aa8.61□□□□□ -1.03
PBRM1-216ENST00000449505 PUS3Q9BZE2 481 aaKnown RBP8.61□□□□□ -1.03
PBRM1-216ENST00000449505 TDRD3Q9H7E2 651 aaKnown RBP8.61□□□□□ -1.03
PBRM1-216ENST00000449505 TCP10L2B9ZVM9 353 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 SEMA3EO15041 775 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 USP2O75604 605 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-216ENST00000449505 CIAO1O76071 339 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 LRRC24Q50LG9 513 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
PBRM1-216ENST00000449505 HHIPL2Q6UWX4 724 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 ZGPATQ8N5A5 531 aaKnown RBP8.6□□□□□ -1.03
PBRM1-216ENST00000449505 OPTNQ96CV9 577 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 USP44Q9H0E7 712 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
PBRM1-216ENST00000449505 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-216ENST00000449505 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-216ENST00000449505 TRIM17Q9Y577 477 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 PCDHAC2Q9Y5I4 1007 aa8.6□□□□□ -1.03
PBRM1-216ENST00000449505 RBBP6Q7Z6E9 1792 aaKnown RBP8.59□□□□□ -1.03
PBRM1-216ENST00000449505 TESPA1A2RU30 521 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-216ENST00000449505 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 IGF2BP3O00425 579 aaKnown RBP eCLIP8.59□□□□□ -1.03
PBRM1-216ENST00000449505 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 CRHR2Q13324 411 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 VGLL4Q14135 290 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-216ENST00000449505 ATP2B3Q16720 1220 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.59□□□□□ -1.03
PBRM1-216ENST00000449505 WRNIP1Q96S55 665 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 TMEM39BQ9GZU3 492 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 ZFYVE28Q9HCC9 887 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 FZD1Q9UP38 647 aa8.59□□□□□ -1.03
PBRM1-216ENST00000449505 HTTP42858 3142 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 CCL15-CCL14A0A0B4J2E2 113 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 SLC34A2O95436 690 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 CETPP11597 493 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 FGFR2P21802 821 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 IL15P40933 162 aaPredicted RBP8.58□□□□□ -1.04
PBRM1-216ENST00000449505 BCAMP50895 628 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 SP3Q02447 781 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 SNAPC2Q13487 334 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 KIF22Q14807 665 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 CCL15Q16663 113 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 OTOP1Q7RTM1 612 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 ERO1BQ86YB8 467 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 KLHDC4Q8TBB5 520 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 OTUD5Q96G74 571 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 TEPSINQ96N21 525 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 ZNF341Q9BYN7 854 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 EFCC1Q9HA90 598 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 DENND2AQ9ULE3 1009 aa8.58□□□□□ -1.04
PBRM1-216ENST00000449505 AOX1Q06278 1338 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms