RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MECOMQ03112 1051 aa17.63■□□□□ 0.41
TNF-208ENST00000449264 ZMYM1Q5SVZ6 1142 aa17.63■□□□□ 0.41
TNF-208ENST00000449264 STRIP1Q5VSL9 837 aa17.63■□□□□ 0.41
TNF-208ENST00000449264 NAA16Q6N069 864 aaPredicted RBP17.63■□□□□ 0.41
TNF-208ENST00000449264 APPBP2Q92624 585 aa17.63■□□□□ 0.41
TNF-208ENST00000449264 MAST3O60307 1309 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 RAD50Q92878 1312 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 F8W031 263 aaPredicted RBP17.62■□□□□ 0.41
TNF-208ENST00000449264 SGSM2O43147 1006 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 CCDC129Q6ZRS4 1044 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 CERS5Q8N5B7 392 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 NSUN4Q96CB9 384 aaKnown RBP17.62■□□□□ 0.41
TNF-208ENST00000449264 TIAM2Q8IVF5 1701 aa17.62■□□□□ 0.41
TNF-208ENST00000449264 TCRBV5S4A2TA0A5A2 114 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 M0R2C6 588 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 CYP7A1P22680 504 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 DACT2Q5SW24 774 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 ZNF589Q86UQ0 364 aaPredicted RBP17.61■□□□□ 0.41
TNF-208ENST00000449264 OSBP2Q969R2 916 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 ADAMTSL1Q8N6G6 1762 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 LMNB1P20700 586 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 MCMDC2Q4G0Z9 681 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 ZNF384Q8TF68 577 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 PUS7LQ9H0K6 701 aaKnown RBP17.61■□□□□ 0.41
TNF-208ENST00000449264 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
TNF-208ENST00000449264 PSMD14O00487 310 aa17.6■□□□□ 0.41
TNF-208ENST00000449264 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
TNF-208ENST00000449264 ADGRA1Q86SQ6 560 aa17.6■□□□□ 0.41
TNF-208ENST00000449264 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
TNF-208ENST00000449264 TTF2Q9UNY4 1162 aaKnown RBP17.6■□□□□ 0.41
TNF-208ENST00000449264 CCDC171Q6TFL3 1326 aa17.59■□□□□ 0.41
TNF-208ENST00000449264 REC8O95072 547 aa17.59■□□□□ 0.41
TNF-208ENST00000449264 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
TNF-208ENST00000449264 CXCL9Q07325 125 aa17.58■□□□□ 0.41
TNF-208ENST00000449264 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.41
TNF-208ENST00000449264 AIDAQ96BJ3 306 aa17.58■□□□□ 0.41
TNF-208ENST00000449264 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.41
TNF-208ENST00000449264 RNF181Q9P0P0 153 aa17.58■□□□□ 0.41
TNF-208ENST00000449264 SUGT1Q9Y2Z0 365 aa17.58■□□□□ 0.41
TNF-208ENST00000449264 GPAA1O43292 621 aa17.58■□□□□ 0.4
TNF-208ENST00000449264 MBD4O95243 580 aa17.58■□□□□ 0.4
TNF-208ENST00000449264 SCNN1DP51172 638 aa17.58■□□□□ 0.4
TNF-208ENST00000449264 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
TNF-208ENST00000449264 FKBP1AP62942 108 aaKnown RBP17.58■□□□□ 0.4
TNF-208ENST00000449264 GSTO1P78417 241 aa17.58■□□□□ 0.4
TNF-208ENST00000449264 CIAPIN1Q6FI81 312 aa17.58■□□□□ 0.4
TNF-208ENST00000449264 RSBN1LQ6PCB5 846 aaPredicted RBP17.58■□□□□ 0.4
TNF-208ENST00000449264 EIF5BO60841 1220 aaKnown RBP17.57■□□□□ 0.4
TNF-208ENST00000449264 AATFQ9NY61 560 aaKnown RBP eCLIP17.57■□□□□ 0.4
TNF-208ENST00000449264 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
TNF-208ENST00000449264 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 MYO3BQ8WXR4 1341 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 MAGEB6P1A0A0J9YX57 407 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 VIL1P09327 827 aaKnown RBP17.56■□□□□ 0.4
TNF-208ENST00000449264 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 ARMT1Q9H993 441 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 ZNF541Q9H0D2 1346 aa17.56■□□□□ 0.4
TNF-208ENST00000449264 FZD9O00144 591 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 IGSF3O75054 1194 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
TNF-208ENST00000449264 TNIP1Q15025 636 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 SLF2Q8IX21 1173 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 LSG1Q9H089 658 aaKnown RBP17.55■□□□□ 0.4
TNF-208ENST00000449264 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 LDHCP07864 332 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 PTH1RQ03431 593 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 VPS53Q5VIR6 699 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
TNF-208ENST00000449264 TMED8Q6PL24 325 aaPredicted RBP17.55■□□□□ 0.4
TNF-208ENST00000449264 NOL10Q9BSC4 688 aaKnown RBP17.55■□□□□ 0.4
TNF-208ENST00000449264 TEKT1Q969V4 418 aa17.54■□□□□ 0.4
TNF-208ENST00000449264 DAGLAQ9Y4D2 1042 aa17.54■□□□□ 0.4
TNF-208ENST00000449264 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
TNF-208ENST00000449264 BTDP43251 543 aa17.53■□□□□ 0.4
TNF-208ENST00000449264 RBM5P52756 815 aaKnown RBP eCLIP17.53■□□□□ 0.4
TNF-208ENST00000449264 STRBPQ96SI9 672 aaKnown RBP17.53■□□□□ 0.4
TNF-208ENST00000449264 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
TNF-208ENST00000449264 GAKO14976 1311 aa17.53■□□□□ 0.4
TNF-208ENST00000449264 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.4
TNF-208ENST00000449264 CRKP46108 304 aa17.52■□□□□ 0.4
TNF-208ENST00000449264 AGBL3Q8NEM8 1001 aa17.52■□□□□ 0.4
TNF-208ENST00000449264 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
TNF-208ENST00000449264 BAG3O95817 575 aa17.52■□□□□ 0.39
TNF-208ENST00000449264 APPP05067 770 aa17.52■□□□□ 0.39
TNF-208ENST00000449264 GMLQ99445 158 aa17.52■□□□□ 0.39
TNF-208ENST00000449264 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.39
TNF-208ENST00000449264 SLC4A4Q9Y6R1 1079 aa17.52■□□□□ 0.39
TNF-208ENST00000449264 BAZ2AQ9UIF9 1905 aaKnown RBP17.51■□□□□ 0.39
TNF-208ENST00000449264 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
TNF-208ENST00000449264 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
TNF-208ENST00000449264 PRKAB2O43741 272 aa17.51■□□□□ 0.39
TNF-208ENST00000449264 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
TNF-208ENST00000449264 HDAC9Q9UKV0 1011 aa17.51■□□□□ 0.39
TNF-208ENST00000449264 PCDHAC2Q9Y5I4 1007 aa17.51■□□□□ 0.39
TNF-208ENST00000449264 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
TNF-208ENST00000449264 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms