RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MS4A1P11836 297 aa17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 RBM5P52756 815 aaKnown RBP eCLIP17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 COL13A1Q5TAT6 717 aaPredicted RBP17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 TDRD3Q9H7E2 651 aaKnown RBP17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 GNL3LQ9NVN8 582 aaKnown RBP17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 SALL1Q9NSC2 1324 aa17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 GRM1Q13255 1194 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 LDLRAD1Q5T700 205 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 ZDHHC15Q96MV8 337 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 GPR108Q9NPR9 543 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 PPP2R3BQ9Y5P8 575 aa17.42■□□□□ 0.38
RTFDC1-204ENST00000449062 MYO1BO43795 1136 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 ZNF157P51786 506 aaPredicted RBP17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 NOGQ13253 232 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 RASGRF1Q13972 1273 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 RASA3Q14644 834 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 DENND2AQ9ULE3 1009 aa17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 PDS5AQ29RF7 1337 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-204ENST00000449062 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 SLC10A3P09131 477 aa17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 PRDX5P30044 214 aa17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 MAP3K11Q16584 847 aa17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 C20orf194Q5TEA3 1177 aa17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 COG6Q9Y2V7 657 aa17.4■□□□□ 0.38
RTFDC1-204ENST00000449062 THSD7BQ9C0I4 1608 aa17.39■□□□□ 0.38
RTFDC1-204ENST00000449062 KIF23Q02241 960 aaPredicted RBP17.39■□□□□ 0.37
RTFDC1-204ENST00000449062 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
RTFDC1-204ENST00000449062 SIRT2Q8IXJ6 389 aa17.39■□□□□ 0.37
RTFDC1-204ENST00000449062 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
RTFDC1-204ENST00000449062 VEZTQ9HBM0 779 aa17.39■□□□□ 0.37
RTFDC1-204ENST00000449062 SSC5DA1L4H1 1573 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 CTCFP49711 727 aaPredicted RBP17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 FKBP1CQ5VVH2 108 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 CDAN1Q8IWY9 1227 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 HMG20BQ9P0W2 317 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 FZD1Q9UP38 647 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 MAST3O60307 1309 aa17.38■□□□□ 0.37
RTFDC1-204ENST00000449062 USP2O75604 605 aaPredicted RBP17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 ARID4AP29374 1257 aaPredicted RBP17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 NF2P35240 595 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 SUPT20HL1Q3ZLR7 823 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 CSRNP1Q96S65 589 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 DAGLAQ9Y4D2 1042 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 PAPPA2Q9BXP8 1791 aa17.37■□□□□ 0.37
RTFDC1-204ENST00000449062 TCP10L2B9ZVM9 353 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 LDHBP07195 334 aaKnown RBP17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 TNFAIP1Q13829 316 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 PRKG1Q13976 671 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 ARMC9Q7Z3E5 817 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 ZNF384Q8TF68 577 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 AIDAQ96BJ3 306 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 EAF2Q96CJ1 260 aaPredicted RBP17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 TMEM39BQ9GZU3 492 aa17.36■□□□□ 0.37
RTFDC1-204ENST00000449062 UNCXA6NJT0 531 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 LBX1P52954 281 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 CACNB3P54284 484 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 CDC42EP5Q6NZY7 148 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 PI16Q6UXB8 463 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 DBNDD2Q9BQY9 259 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 ANGEL1Q9UNK9 670 aaKnown RBP17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 ARAP2Q8WZ64 1704 aa17.35■□□□□ 0.37
RTFDC1-204ENST00000449062 GAKO14976 1311 aa17.34■□□□□ 0.37
RTFDC1-204ENST00000449062 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
RTFDC1-204ENST00000449062 MCAMP43121 646 aa17.34■□□□□ 0.37
RTFDC1-204ENST00000449062 TTLL12Q14166 644 aaPredicted RBP17.34■□□□□ 0.37
RTFDC1-204ENST00000449062 SPATA5Q8NB90 893 aa17.34■□□□□ 0.37
RTFDC1-204ENST00000449062 CA12O43570 354 aa17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 TBC1D9Q6ZT07 1266 aa17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 ZGPATQ8N5A5 531 aaKnown RBP17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 EXOC6BQ9Y2D4 811 aa17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 ECM29Q5VYK3 1845 aa17.33■□□□□ 0.36
RTFDC1-204ENST00000449062 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
RTFDC1-204ENST00000449062 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-204ENST00000449062 SPTY2D1Q68D10 685 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-204ENST00000449062 BEGAINQ9BUH8 593 aa17.32■□□□□ 0.36
RTFDC1-204ENST00000449062 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms