RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 VPS37DQ86XT2 251 aa22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 TDRD7Q8NHU6 1098 aaKnown RBP22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 OTUD5Q96G74 571 aa22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 MS4A4AQ96JQ5 239 aa22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 TMEM39BQ9GZU3 492 aa22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 A0A1B0GUL6 1792 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 GRM8O00222 908 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 FRAT2O75474 233 aaPredicted RBP22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 WDHD1O75717 1129 aaPredicted RBP22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 CRKP46108 304 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 CAP1Q01518 475 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 UBE4AQ14139 1066 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 SLC4A10Q6U841 1118 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 CDAN1Q8IWY9 1227 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 BRI3BPQ8WY22 251 aa22.81■■□□□ 1.24
CHCHD3-203ENST00000448878 CHAF1AQ13111 956 aaPredicted RBP22.8■■□□□ 1.24
CHCHD3-203ENST00000448878 VGLL4Q14135 290 aa22.8■■□□□ 1.24
CHCHD3-203ENST00000448878 IQSEC3Q9UPP2 1182 aaPredicted RBP22.8■■□□□ 1.24
CHCHD3-203ENST00000448878 PTCH2Q9Y6C5 1203 aa22.8■■□□□ 1.24
CHCHD3-203ENST00000448878 FAM84BQ96KN1 310 aaPredicted RBP22.79■■□□□ 1.24
CHCHD3-203ENST00000448878 TEPSINQ96N21 525 aa22.79■■□□□ 1.24
CHCHD3-203ENST00000448878 LAMB1P07942 1786 aa22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 ECM2O94769 699 aaPredicted RBP22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 KIF22Q14807 665 aa22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 FAM43AQ8N2R8 423 aa22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 ZNF333Q96JL9 665 aa22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 PUS3Q9BZE2 481 aaKnown RBP22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 OTOFQ9HC10 1997 aa22.78■■□□□ 1.24
CHCHD3-203ENST00000448878 CACNB3P54284 484 aa22.77■■□□□ 1.24
CHCHD3-203ENST00000448878 HTTP42858 3142 aa22.77■■□□□ 1.24
CHCHD3-203ENST00000448878 CACNA1FO60840 1977 aa22.76■■□□□ 1.23
CHCHD3-203ENST00000448878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.76■■□□□ 1.232e-18■□□□□ 9
CHCHD3-203ENST00000448878 RBBP6Q7Z6E9 1792 aaKnown RBP22.76■■□□□ 1.23
CHCHD3-203ENST00000448878 WDR63Q8IWG1 891 aa22.75■■□□□ 1.23
CHCHD3-203ENST00000448878 SRCIN1Q9C0H9 1055 aa22.75■■□□□ 1.23
CHCHD3-203ENST00000448878 TMOD2Q9NZR1 351 aa22.75■■□□□ 1.23
CHCHD3-203ENST00000448878 CENPFP49454 3210 aa22.75■■□□□ 1.23
CHCHD3-203ENST00000448878 CETPP11597 493 aa22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 GRIK5Q16478 980 aa22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 CAVIN4Q5BKX8 364 aa22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 SH3TC2Q8TF17 1288 aa22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 TEKT1Q969V4 418 aa22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 SUCLG2Q96I99 432 aa22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 MKI67P46013 3256 aaKnown RBP22.74■■□□□ 1.23
CHCHD3-203ENST00000448878 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
CHCHD3-203ENST00000448878 ZKSCAN4Q969J2 545 aaPredicted RBP22.73■■□□□ 1.23
CHCHD3-203ENST00000448878 WRNIP1Q96S55 665 aa22.73■■□□□ 1.23
CHCHD3-203ENST00000448878 MROH5Q6ZUA9 1318 aa22.73■■□□□ 1.23
CHCHD3-203ENST00000448878 SPDYE5A6NIY4 337 aa22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 METTL24Q5JXM2 366 aa22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 ERO1BQ86YB8 467 aa22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 TBC1D22AQ8WUA7 517 aa22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 ARHGAP39Q9C0H5 1083 aa22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 COLQQ9Y215 455 aaPredicted RBP22.72■■□□□ 1.23
CHCHD3-203ENST00000448878 TLR2O60603 784 aa22.71■■□□□ 1.23
CHCHD3-203ENST00000448878 FXR1P51114 621 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHCHD3-203ENST00000448878 RIPOR2Q9Y4F9 1068 aa22.71■■□□□ 1.23
CHCHD3-203ENST00000448878 BTBD19C9JJ37 291 aa22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 LACTBP83111 547 aaPredicted RBP22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 SNAPC2Q13487 334 aa22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 FBXO33Q7Z6M2 555 aa22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 HOOK2Q96ED9 719 aa22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 SNCAIPQ9Y6H5 919 aa22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 KIAA0100Q14667 2235 aaKnown RBP22.7■■□□□ 1.22
CHCHD3-203ENST00000448878 IRF6O14896 467 aa22.69■■□□□ 1.22
CHCHD3-203ENST00000448878 NBPF7P0C2Y1 421 aaPredicted RBP22.69■■□□□ 1.22
CHCHD3-203ENST00000448878 HDLBPQ00341 1268 aaKnown RBP22.69■■□□□ 1.22
CHCHD3-203ENST00000448878 LRRC24Q50LG9 513 aa22.69■■□□□ 1.22
CHCHD3-203ENST00000448878 ARAP2Q8WZ64 1704 aa22.68■■□□□ 1.22
CHCHD3-203ENST00000448878 DCAF15Q66K64 600 aa22.68■■□□□ 1.22
CHCHD3-203ENST00000448878 MIGA2Q7L4E1 593 aa22.68■■□□□ 1.22
CHCHD3-203ENST00000448878 BICC1Q9H694 974 aaKnown RBP22.68■■□□□ 1.22
CHCHD3-203ENST00000448878 BCAMP50895 628 aa22.67■■□□□ 1.22
CHCHD3-203ENST00000448878 KAZALD1Q96I82 304 aa22.67■■□□□ 1.22
CHCHD3-203ENST00000448878 SPINK5Q9NQ38 1064 aaPredicted RBP22.67■■□□□ 1.22
CHCHD3-203ENST00000448878 H0YGN5 161 aa22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 PPIL2Q13356 520 aa22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 FAM83AQ86UY5 434 aa22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 DPF3Q92784 378 aa22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 ZDHHC15Q96MV8 337 aa22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 CPA4Q9UI42 421 aa22.66■■□□□ 1.22
CHCHD3-203ENST00000448878 MAST3O60307 1309 aa22.65■■□□□ 1.22
CHCHD3-203ENST00000448878 PDE8BO95263 885 aa22.65■■□□□ 1.22
CHCHD3-203ENST00000448878 GNRH1P01148 92 aa22.65■■□□□ 1.22
CHCHD3-203ENST00000448878 ZNF341Q9BYN7 854 aa22.65■■□□□ 1.22
CHCHD3-203ENST00000448878 ZSWIM8A7E2V4 1837 aa22.64■■□□□ 1.22
CHCHD3-203ENST00000448878 FMNL1O95466 1100 aaPredicted RBP22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 ZEB1P37275 1124 aaPredicted RBP22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 PSMC4P43686 418 aa22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 PRMT2P55345 433 aa22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 APOBEC3HQ6NTF7 200 aaKnown RBP22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 RAET1EQ8TD07 263 aa22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 BIN2Q9UBW5 565 aaPredicted RBP22.64■■□□□ 1.21
CHCHD3-203ENST00000448878 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
CHCHD3-203ENST00000448878 HOXD10P28358 340 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms