RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SURF6O75683 361 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 MAP2K2P36507 400 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 FKBP1BP68106 108 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 RGMBQ6NW40 437 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 MOB2Q70IA6 237 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 VEZTQ9HBM0 779 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 ZNF70Q9UC06 446 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 DENND2AQ9ULE3 1009 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 THSD7BQ9C0I4 1608 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 PAPPA2Q9BXP8 1791 aa15.75■□□□□ 0.11
PRPF40A-203ENST00000448428 FAM155AB1AL88 458 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 MAP2K1Q02750 393 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 C20orf194Q5TEA3 1177 aa15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 TEKT1Q969V4 418 aa15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 ZIC5Q96T25 663 aa15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
PRPF40A-203ENST00000448428 PCNTO95613 3336 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 FOXN1O15353 648 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 NF2P35240 595 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 ZNF157P51786 506 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 OS9Q13438 667 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 RASGRF1Q13972 1273 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 TTLL12Q14166 644 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 HHIPL2Q6UWX4 724 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 ZDHHC15Q96MV8 337 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 PPP2R3BQ9Y5P8 575 aa15.73■□□□□ 0.11
PRPF40A-203ENST00000448428 MAST3O60307 1309 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 SALL1Q9NSC2 1324 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 PRDX5P30044 214 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 PRKG1Q13976 671 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 PDE3AQ14432 1141 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 RASA3Q14644 834 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 GORABQ5T7V8 394 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 APOBEC3HQ6NTF7 200 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 YTHDC1Q96MU7 727 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 GPR108Q9NPR9 543 aa15.72■□□□□ 0.11
PRPF40A-203ENST00000448428 TCP10L2B9ZVM9 353 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 NOGQ13253 232 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 DIXDC1Q155Q3 683 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 NBPF12Q5TAG4 269 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 FZD1Q9UP38 647 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
PRPF40A-203ENST00000448428 MYH2Q9UKX2 1941 aa15.7■□□□□ 0.1
PRPF40A-203ENST00000448428 TNFAIP1Q13829 316 aa15.7■□□□□ 0.1
PRPF40A-203ENST00000448428 COL13A1Q5TAT6 717 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-203ENST00000448428 ARMC9Q7Z3E5 817 aa15.7■□□□□ 0.1
PRPF40A-203ENST00000448428 RPAP2Q8IXW5 612 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-203ENST00000448428 HMG20BQ9P0W2 317 aa15.7■□□□□ 0.1
PRPF40A-203ENST00000448428 PDS5AQ29RF7 1337 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 SLC10A3P09131 477 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 CACNB3P54284 484 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 LDLRAD1Q5T700 205 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 RASAL3Q86YV0 1011 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 ZGPATQ8N5A5 531 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 DBNDD2Q9BQY9 259 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 CHMP4BQ9H444 224 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 ABCF2Q9UG63 623 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 ANGEL1Q9UNK9 670 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 EXOC6BQ9Y2D4 811 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 DAGLAQ9Y4D2 1042 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 SSC5DA1L4H1 1573 aa15.69■□□□□ 0.1
PRPF40A-203ENST00000448428 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 ARID4AP29374 1257 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 TNNI2P48788 182 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 PI16Q6UXB8 463 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 CDAN1Q8IWY9 1227 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 SPATA5Q8NB90 893 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 TEPSINQ96N21 525 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 BEGAINQ9BUH8 593 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 TMEM39BQ9GZU3 492 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
PRPF40A-203ENST00000448428 USP2O75604 605 aaPredicted RBP15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 UQCRFS1P1P0C7P4 283 aa15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 MCAMP43121 646 aa15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 LBX1P52954 281 aa15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 MAP3K11Q16584 847 aa15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 SPTY2D1Q68D10 685 aaPredicted RBP15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 EAF2Q96CJ1 260 aaPredicted RBP15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 CCDC8Q9H0W5 538 aaPredicted RBP15.67■□□□□ 0.1
PRPF40A-203ENST00000448428 HSPA8P11142 646 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-203ENST00000448428 CCDC158Q5M9N0 1113 aa15.66■□□□□ 0.1
PRPF40A-203ENST00000448428 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
PRPF40A-203ENST00000448428 FKBP1CQ5VVH2 108 aa15.66■□□□□ 0.1
PRPF40A-203ENST00000448428 CDC42EP5Q6NZY7 148 aa15.66■□□□□ 0.1
PRPF40A-203ENST00000448428 ERICH6Q7L0X2 663 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms