RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 IQSEC3Q9UPP2 1182 aaPredicted RBP21.64■■□□□ 1.05
HLCS-205ENST00000448340 UQCRFS1P1P0C7P4 283 aa21.63■■□□□ 1.05
HLCS-205ENST00000448340 FKBP1AP62942 108 aaKnown RBP21.63■■□□□ 1.05
HLCS-205ENST00000448340 RSBN1LQ6PCB5 846 aaPredicted RBP21.63■■□□□ 1.05
HLCS-205ENST00000448340 FBXW7Q969H0 707 aa21.63■■□□□ 1.05
HLCS-205ENST00000448340 ZNF512BQ96KM6 892 aaPredicted RBP21.63■■□□□ 1.05
HLCS-205ENST00000448340 DENND2AQ9ULE3 1009 aa21.63■■□□□ 1.05
HLCS-205ENST00000448340 MYH13Q9UKX3 1938 aa21.63■■□□□ 1.05
HLCS-205ENST00000448340 ZNF646O15015 1829 aaPredicted RBP21.62■■□□□ 1.05
HLCS-205ENST00000448340 MYO3BQ8WXR4 1341 aa21.62■■□□□ 1.05
HLCS-205ENST00000448340 RPS12P25398 132 aaKnown RBP21.62■■□□□ 1.05
HLCS-205ENST00000448340 ARID4AP29374 1257 aaPredicted RBP21.62■■□□□ 1.05
HLCS-205ENST00000448340 TTC39AQ5SRH9 613 aa21.62■■□□□ 1.05
HLCS-205ENST00000448340 DLK2Q6UY11 383 aa21.62■■□□□ 1.05
HLCS-205ENST00000448340 AGBL3Q8NEM8 1001 aa21.62■■□□□ 1.05
HLCS-205ENST00000448340 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
HLCS-205ENST00000448340 PDS5AQ29RF7 1337 aaKnown RBP21.61■■□□□ 1.05
HLCS-205ENST00000448340 DPF2Q92785 391 aa21.61■■□□□ 1.05
HLCS-205ENST00000448340 ZBTB12Q9Y330 459 aaPredicted RBP21.61■■□□□ 1.05
HLCS-205ENST00000448340 CHAF1AQ13111 956 aaPredicted RBP21.6■■□□□ 1.05
HLCS-205ENST00000448340 RASGRF1Q13972 1273 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 USP48Q86UV5 1035 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 MICALL2Q8IY33 904 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 WDR66Q8TBY9 1149 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 TBC1D22AQ8WUA7 517 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 GMLQ99445 158 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 ZNF408Q9H9D4 720 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 JAG2Q9Y219 1238 aa21.6■■□□□ 1.05
HLCS-205ENST00000448340 NUCB1Q02818 461 aa21.59■■□□□ 1.05
HLCS-205ENST00000448340 NOGQ13253 232 aa21.59■■□□□ 1.05
HLCS-205ENST00000448340 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
HLCS-205ENST00000448340 MXD3Q9BW11 206 aa21.59■■□□□ 1.05
HLCS-205ENST00000448340 COL1A1P02452 1464 aaPredicted RBP21.58■■□□□ 1.05
HLCS-205ENST00000448340 FAM155AB1AL88 458 aaPredicted RBP21.58■■□□□ 1.05
HLCS-205ENST00000448340 H7C1D1 291 aa21.58■■□□□ 1.05
HLCS-205ENST00000448340 MFSD14BQ5SR56 506 aa21.58■■□□□ 1.05
HLCS-205ENST00000448340 CERS5Q8N5B7 392 aa21.58■■□□□ 1.05
HLCS-205ENST00000448340 SPATA5Q8NB90 893 aa21.58■■□□□ 1.05
HLCS-205ENST00000448340 HMG20BQ9P0W2 317 aa21.58■■□□□ 1.05
HLCS-205ENST00000448340 EGFRP00533 1210 aa21.57■■□□□ 1.04
HLCS-205ENST00000448340 MCAMP43121 646 aa21.57■■□□□ 1.04
HLCS-205ENST00000448340 MMP14P50281 582 aa21.57■■□□□ 1.04
HLCS-205ENST00000448340 SAMD7Q7Z3H4 446 aa21.57■■□□□ 1.04
HLCS-205ENST00000448340 CHD1LQ86WJ1 897 aa21.57■■□□□ 1.04
HLCS-205ENST00000448340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.57■■□□□ 1.04
HLCS-205ENST00000448340 CCDC136Q96JN2 1154 aa21.57■■□□□ 1.04
HLCS-205ENST00000448340 SALL1Q9NSC2 1324 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 HUNKP57058 714 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 DGKZQ13574 1117 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 SCARF1Q14162 830 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 GPATCH3Q96I76 525 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 LNPKQ9C0E8 428 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 SUGT1Q9Y2Z0 365 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 AKAP11Q9UKA4 1901 aa21.56■■□□□ 1.04
HLCS-205ENST00000448340 USP17L8P0C7I0 530 aa21.55■■□□□ 1.04
HLCS-205ENST00000448340 ATP5JP18859 108 aa21.55■■□□□ 1.04
HLCS-205ENST00000448340 ZGPATQ8N5A5 531 aaKnown RBP21.55■■□□□ 1.04
HLCS-205ENST00000448340 ECHDC1Q9NTX5 307 aa21.55■■□□□ 1.04
HLCS-205ENST00000448340 CASP8AP2Q9UKL3 1982 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 ZNF280AP59817 542 aaPredicted RBP21.54■■□□□ 1.04
HLCS-205ENST00000448340 PI16Q6UXB8 463 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
HLCS-205ENST00000448340 KIAA0825Q8IV33 1275 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 OGFOD1Q8N543 542 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 PPP4R2Q9NY27 417 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 HDAC9Q9UKV0 1011 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 TTC41PQ6P2S7 1318 aa21.54■■□□□ 1.04
HLCS-205ENST00000448340 TBC1D10BQ4KMP7 808 aaPredicted RBP21.53■■□□□ 1.04
HLCS-205ENST00000448340 RGMBQ6NW40 437 aa21.53■■□□□ 1.04
HLCS-205ENST00000448340 KRT26Q7Z3Y9 468 aa21.53■■□□□ 1.04
HLCS-205ENST00000448340 OTUD7AQ8TE49 926 aaPredicted RBP21.53■■□□□ 1.04
HLCS-205ENST00000448340 SNRKQ9NRH2 765 aa21.53■■□□□ 1.04
HLCS-205ENST00000448340 SALL3Q9BXA9 1300 aa21.53■■□□□ 1.04
HLCS-205ENST00000448340 MX1P20591 662 aa21.52■■□□□ 1.04
HLCS-205ENST00000448340 SPTY2D1Q68D10 685 aaPredicted RBP21.52■■□□□ 1.04
HLCS-205ENST00000448340 GBA2Q9HCG7 927 aaPredicted RBP21.52■■□□□ 1.04
HLCS-205ENST00000448340 F8W031 263 aaPredicted RBP21.51■■□□□ 1.03
HLCS-205ENST00000448340 ZAP70P43403 619 aa21.51■■□□□ 1.03
HLCS-205ENST00000448340 GRIK5Q16478 980 aa21.51■■□□□ 1.03
HLCS-205ENST00000448340 SAGE1Q9NXZ1 904 aa21.51■■□□□ 1.03
HLCS-205ENST00000448340 TTF2Q9UNY4 1162 aaKnown RBP21.51■■□□□ 1.03
HLCS-205ENST00000448340 ADM5C9JUS6 153 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 ERC2O15083 957 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 CYP2E1P05181 493 aaPredicted RBP21.5■■□□□ 1.03
HLCS-205ENST00000448340 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
HLCS-205ENST00000448340 KIF23Q02241 960 aaPredicted RBP21.5■■□□□ 1.03
HLCS-205ENST00000448340 CCDC102AQ96A19 550 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 HAUS7Q99871 368 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 BOLA2Q9H3K6 86 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 ABCF2Q9UG63 623 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 STAP2Q9UGK3 403 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 MAST3O60307 1309 aa21.5■■□□□ 1.03
HLCS-205ENST00000448340 TNRC18O15417 2968 aaPredicted RBP21.49■■□□□ 1.03
HLCS-205ENST00000448340 IGSF3O75054 1194 aa21.49■■□□□ 1.03
HLCS-205ENST00000448340 PRDX5P30044 214 aa21.49■■□□□ 1.03
HLCS-205ENST00000448340 HDLBPQ00341 1268 aaKnown RBP21.49■■□□□ 1.03
HLCS-205ENST00000448340 TBC1D9Q6ZT07 1266 aa21.49■■□□□ 1.03
HLCS-205ENST00000448340 ERICH6Q7L0X2 663 aa21.49■■□□□ 1.03
HLCS-205ENST00000448340 C2orf69Q8N8R5 385 aa21.49■■□□□ 1.03
HLCS-205ENST00000448340 MRIQ9BWK5 157 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms