RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MANSC4A6NHS7 340 aaPredicted RBP35.46■■■■□ 3.27
CBX4-202ENST00000448310 IREB2P48200 963 aaKnown RBP35.46■■■■□ 3.27
CBX4-202ENST00000448310 TCP10L2B9ZVM9 353 aa35.45■■■■□ 3.27
CBX4-202ENST00000448310 ZBTB48P10074 688 aaPredicted RBP35.45■■■■□ 3.27
CBX4-202ENST00000448310 RFX5P48382 616 aaPredicted RBP35.45■■■■□ 3.27
CBX4-202ENST00000448310 NOM1Q5C9Z4 860 aaKnown RBP35.44■■■■□ 3.26
CBX4-202ENST00000448310 TRMT2AQ8IZ69 625 aaKnown RBP35.44■■■■□ 3.26
CBX4-202ENST00000448310 CFHR5Q9BXR6 569 aa35.44■■■■□ 3.26
CBX4-202ENST00000448310 HPS5Q9UPZ3 1129 aa35.44■■■■□ 3.26
CBX4-202ENST00000448310 GJA5P36382 358 aa35.43■■■■□ 3.26
CBX4-202ENST00000448310 PUM3Q15397 648 aaKnown RBP35.43■■■■□ 3.26
CBX4-202ENST00000448310 IFNL1Q8IU54 200 aa35.43■■■■□ 3.26
CBX4-202ENST00000448310 TBC1D22AQ8WUA7 517 aa35.43■■■■□ 3.26
CBX4-202ENST00000448310 TEPSINQ96N21 525 aa35.43■■■■□ 3.26
CBX4-202ENST00000448310 TMEM39BQ9GZU3 492 aa35.43■■■■□ 3.26
CBX4-202ENST00000448310 UNCXA6NJT0 531 aa35.42■■■■□ 3.26
CBX4-202ENST00000448310 EYA2O00167 538 aa35.42■■■■□ 3.26
CBX4-202ENST00000448310 FGFR2P21802 821 aa35.42■■■■□ 3.26
CBX4-202ENST00000448310 ANKRD13AQ8IZ07 590 aa35.42■■■■□ 3.26
CBX4-202ENST00000448310 IGF2BP3O00425 579 aaKnown RBP eCLIP35.41■■■■□ 3.26
CBX4-202ENST00000448310 FKTNO75072 461 aa35.41■■■■□ 3.26
CBX4-202ENST00000448310 ALDH1A1P00352 501 aa35.41■■■■□ 3.26
CBX4-202ENST00000448310 IFIT1P09914 478 aaKnown RBP35.41■■■■□ 3.26
CBX4-202ENST00000448310 INHBEP58166 350 aa35.4■■■■□ 3.26
CBX4-202ENST00000448310 PKN2Q16513 984 aaKnown RBP35.4■■■■□ 3.26
CBX4-202ENST00000448310 NOB1Q9ULX3 412 aaKnown RBP35.4■■■■□ 3.26
CBX4-202ENST00000448310 CACNB3P54284 484 aa35.39■■■■□ 3.26
CBX4-202ENST00000448310 ELP3Q9H9T3 547 aa35.39■■■■□ 3.26
CBX4-202ENST00000448310 TNNI2P48788 182 aa35.38■■■■□ 3.25
CBX4-202ENST00000448310 HDLBPQ00341 1268 aaKnown RBP35.38■■■■□ 3.25
CBX4-202ENST00000448310 TEKT1Q969V4 418 aa35.38■■■■□ 3.25
CBX4-202ENST00000448310 TNRC18O15417 2968 aaPredicted RBP35.38■■■■□ 3.25
CBX4-202ENST00000448310 KIF16BQ96L93 1317 aa35.37■■■■□ 3.25
CBX4-202ENST00000448310 UBTFL1P0CB47 393 aaPredicted RBP35.37■■■■□ 3.25
CBX4-202ENST00000448310 ATG9AQ7Z3C6 839 aa35.37■■■■□ 3.25
CBX4-202ENST00000448310 SLC5A1P13866 664 aa35.36■■■■□ 3.25
CBX4-202ENST00000448310 SIL1Q9H173 461 aa35.36■■■■□ 3.25
CBX4-202ENST00000448310 OPTNQ96CV9 577 aa35.35■■■■□ 3.25
CBX4-202ENST00000448310 PPP1R3FQ6ZSY5 799 aaPredicted RBP35.34■■■■□ 3.25
CBX4-202ENST00000448310 CNKSR2Q8WXI2 1034 aa35.34■■■■□ 3.25
CBX4-202ENST00000448310 LPIN2Q92539 896 aa35.34■■■■□ 3.25
CBX4-202ENST00000448310 CT47B1P0C2W7 299 aaPredicted RBP35.33■■■■□ 3.25
CBX4-202ENST00000448310 FBXO46Q6PJ61 603 aaPredicted RBP35.33■■■■□ 3.25
CBX4-202ENST00000448310 ZDHHC15Q96MV8 337 aa35.33■■■■□ 3.25
CBX4-202ENST00000448310 PTPN18Q99952 460 aa35.32■■■■□ 3.24
CBX4-202ENST00000448310 PDE4DIPQ5VU43 2346 aa35.32■■■■□ 3.24
CBX4-202ENST00000448310 VGLL4Q14135 290 aa35.31■■■■□ 3.24
CBX4-202ENST00000448310 APOBEC3HQ6NTF7 200 aaKnown RBP35.31■■■■□ 3.24
CBX4-202ENST00000448310 API5Q9BZZ5 524 aaKnown RBP35.31■■■■□ 3.24
CBX4-202ENST00000448310 LRRFIP2Q9Y608 721 aaKnown RBP35.31■■■■□ 3.24
CBX4-202ENST00000448310 MAST3O60307 1309 aa35.31■■■■□ 3.24
CBX4-202ENST00000448310 MAP3K9P80192 1104 aa35.3■■■■□ 3.24
CBX4-202ENST00000448310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP35.3■■■■□ 3.245e-8■■■■□ 20.7
CBX4-202ENST00000448310 MRIQ9BWK5 157 aa35.3■■■■□ 3.24
CBX4-202ENST00000448310 TMOD2Q9NZR1 351 aa35.3■■■■□ 3.24
CBX4-202ENST00000448310 SUGT1Q9Y2Z0 365 aa35.3■■■■□ 3.24
CBX4-202ENST00000448310 CRHR2Q13324 411 aa35.29■■■■□ 3.24
CBX4-202ENST00000448310 TESPA1A2RU30 521 aaPredicted RBP35.28■■■■□ 3.24
CBX4-202ENST00000448310 ATP2B3Q16720 1220 aa35.28■■■■□ 3.24
CBX4-202ENST00000448310 OTUD7BQ6GQQ9 843 aa35.28■■■■□ 3.24
CBX4-202ENST00000448310 PA2G4Q9UQ80 394 aaKnown RBP35.28■■■■□ 3.24
CBX4-202ENST00000448310 CCER2I3L3R5 266 aa35.27■■■■□ 3.24
CBX4-202ENST00000448310 CIAO1O76071 339 aa35.27■■■■□ 3.24
CBX4-202ENST00000448310 WDR66Q8TBY9 1149 aa35.27■■■■□ 3.24
CBX4-202ENST00000448310 MEIS3Q99687 375 aa35.27■■■■□ 3.24
CBX4-202ENST00000448310 CEP126Q9P2H0 1117 aa35.27■■■■□ 3.24
CBX4-202ENST00000448310 TRIM17Q9Y577 477 aa35.27■■■■□ 3.24
CBX4-202ENST00000448310 RARSP54136 660 aaKnown RBP35.26■■■■□ 3.24
CBX4-202ENST00000448310 HHIPL2Q6UWX4 724 aa35.26■■■■□ 3.24
CBX4-202ENST00000448310 MS4A4AQ96JQ5 239 aa35.26■■■■□ 3.24
CBX4-202ENST00000448310 FBXO3Q9UK99 471 aa35.26■■■■□ 3.24
CBX4-202ENST00000448310 CSADQ9Y600 493 aa35.26■■■■□ 3.24
CBX4-202ENST00000448310 FAM83AQ86UY5 434 aa35.25■■■■□ 3.23
CBX4-202ENST00000448310 AK9Q5TCS8 1911 aa35.24■■■■□ 3.23
CBX4-202ENST00000448310 OTOP1Q7RTM1 612 aa35.24■■■■□ 3.23
CBX4-202ENST00000448310 OTUD5Q96G74 571 aa35.24■■■■□ 3.23
CBX4-202ENST00000448310 DIXDC1Q155Q3 683 aa35.23■■■■□ 3.23
CBX4-202ENST00000448310 FKBP1CQ5VVH2 108 aa35.23■■■■□ 3.23
CBX4-202ENST00000448310 CD99L2Q8TCZ2 262 aa35.23■■■■□ 3.23
CBX4-202ENST00000448310 BRI3BPQ8WY22 251 aa35.23■■■■□ 3.23
CBX4-202ENST00000448310 CCL15-CCL14A0A0B4J2E2 113 aa35.22■■■■□ 3.23
CBX4-202ENST00000448310 PRDX5P30044 214 aa35.22■■■■□ 3.23
CBX4-202ENST00000448310 CCL15Q16663 113 aa35.22■■■■□ 3.23
CBX4-202ENST00000448310 IL15P40933 162 aaPredicted RBP35.21■■■■□ 3.23
CBX4-202ENST00000448310 PHKA1P46020 1223 aa35.21■■■■□ 3.23
CBX4-202ENST00000448310 WRNIP1Q96S55 665 aa35.21■■■■□ 3.23
CBX4-202ENST00000448310 DAGLAQ9Y4D2 1042 aa35.21■■■■□ 3.23
CBX4-202ENST00000448310 SNCAIPQ9Y6H5 919 aa35.21■■■■□ 3.23
CBX4-202ENST00000448310 ZKSCAN4Q969J2 545 aaPredicted RBP35.2■■■■□ 3.23
CBX4-202ENST00000448310 ERO1AQ96HE7 468 aa35.2■■■■□ 3.23
CBX4-202ENST00000448310 GNL3LQ9NVN8 582 aaKnown RBP35.2■■■■□ 3.23
CBX4-202ENST00000448310 HDAC5Q9UQL6 1122 aa35.2■■■■□ 3.23
CBX4-202ENST00000448310 ADORA1P30542 326 aa35.19■■■■□ 3.22
CBX4-202ENST00000448310 GTF2A2P52657 109 aa35.19■■■■□ 3.22
CBX4-202ENST00000448310 RPAP1Q9BWH6 1393 aaPredicted RBP35.19■■■■□ 3.22
CBX4-202ENST00000448310 COPRSQ9NQ92 184 aa35.19■■■■□ 3.22
CBX4-202ENST00000448310 SPDYE5A6NIY4 337 aa35.18■■■■□ 3.22
CBX4-202ENST00000448310 HTTP42858 3142 aa35.17■■■■□ 3.22
CBX4-202ENST00000448310 MYH2Q9UKX2 1941 aa35.17■■■■□ 3.22
CBX4-202ENST00000448310 CAP1Q01518 475 aa35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms