RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 DZIP1LQ8IYY4 767 aaKnown RBP22.03■■□□□ 1.12
DDX56-207ENST00000448192 TDRD3Q9H7E2 651 aaKnown RBP22.03■■□□□ 1.12
DDX56-207ENST00000448192 SRGAP3O43295 1099 aa22.02■■□□□ 1.12
DDX56-207ENST00000448192 TRPA1O75762 1119 aa22.02■■□□□ 1.12
DDX56-207ENST00000448192 COPRSQ9NQ92 184 aa22.02■■□□□ 1.12
DDX56-207ENST00000448192 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
DDX56-207ENST00000448192 ZNF70Q9UC06 446 aaPredicted RBP22.02■■□□□ 1.12
DDX56-207ENST00000448192 MKRN3Q13064 507 aaKnown RBP22.01■■□□□ 1.11
DDX56-207ENST00000448192 RASA3Q14644 834 aa22.01■■□□□ 1.11
DDX56-207ENST00000448192 SUPT20HL1Q3ZLR7 823 aa22.01■■□□□ 1.11
DDX56-207ENST00000448192 SPDYE2Q495Y8 402 aa22.01■■□□□ 1.11
DDX56-207ENST00000448192 ZKSCAN2Q63HK3 967 aa22.01■■□□□ 1.11
DDX56-207ENST00000448192 RNF186Q9NXI6 227 aa22.01■■□□□ 1.11
DDX56-207ENST00000448192 PPP1R12BO60237 982 aaPredicted RBP22■■□□□ 1.11
DDX56-207ENST00000448192 TNFAIP1Q13829 316 aa22■■□□□ 1.11
DDX56-207ENST00000448192 NBPF12Q5TAG4 269 aaPredicted RBP22■■□□□ 1.11
DDX56-207ENST00000448192 REM2Q8IYK8 340 aaPredicted RBP22■■□□□ 1.11
DDX56-207ENST00000448192 TEKT1Q969V4 418 aa22■■□□□ 1.11
DDX56-207ENST00000448192 SAGE1Q9NXZ1 904 aa22■■□□□ 1.11
DDX56-207ENST00000448192 SSC5DA1L4H1 1573 aa21.99■■□□□ 1.11
DDX56-207ENST00000448192 GNAI2P04899 355 aa21.99■■□□□ 1.11
DDX56-207ENST00000448192 HDLBPQ00341 1268 aaKnown RBP21.99■■□□□ 1.11
DDX56-207ENST00000448192 LDLRAD1Q5T700 205 aa21.99■■□□□ 1.11
DDX56-207ENST00000448192 TMEM57Q8N5G2 664 aa21.99■■□□□ 1.11
DDX56-207ENST00000448192 TCP10L2B9ZVM9 353 aa21.98■■□□□ 1.11
DDX56-207ENST00000448192 WDR66Q8TBY9 1149 aa21.98■■□□□ 1.11
DDX56-207ENST00000448192 GNL3LQ9NVN8 582 aaKnown RBP21.98■■□□□ 1.11
DDX56-207ENST00000448192 MAST3O60307 1309 aa21.98■■□□□ 1.11
DDX56-207ENST00000448192 ZBED9Q6R2W3 1325 aa21.98■■□□□ 1.11
DDX56-207ENST00000448192 MTX1Q13505 466 aa21.97■■□□□ 1.11
DDX56-207ENST00000448192 SLC10A4Q96EP9 437 aa21.97■■□□□ 1.11
DDX56-207ENST00000448192 SUGT1Q9Y2Z0 365 aa21.97■■□□□ 1.11
DDX56-207ENST00000448192 TNNI2P48788 182 aa21.96■■□□□ 1.11
DDX56-207ENST00000448192 ADORA1P30542 326 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 PHKA1P46020 1223 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 TIMM10P62072 90 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 TFCP2Q12800 502 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 MAP3K11Q16584 847 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 FTSJ3Q8IY81 847 aaKnown RBP21.95■■□□□ 1.1
DDX56-207ENST00000448192 CLMNQ96JQ2 1002 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 ZDHHC15Q96MV8 337 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 MRIQ9BWK5 157 aa21.95■■□□□ 1.1
DDX56-207ENST00000448192 IREB2P48200 963 aaKnown RBP21.94■■□□□ 1.1
DDX56-207ENST00000448192 CACNB3P54284 484 aa21.94■■□□□ 1.1
DDX56-207ENST00000448192 ABHD8Q96I13 439 aa21.94■■□□□ 1.1
DDX56-207ENST00000448192 TMEM39BQ9GZU3 492 aa21.94■■□□□ 1.1
DDX56-207ENST00000448192 TMOD2Q9NZR1 351 aa21.94■■□□□ 1.1
DDX56-207ENST00000448192 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 USP2O75604 605 aaPredicted RBP21.93■■□□□ 1.1
DDX56-207ENST00000448192 SPRYD7Q5W111 196 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 CCDC102BQ68D86 513 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 HHIPL2Q6UWX4 724 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 CDAN1Q8IWY9 1227 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 TEPSINQ96N21 525 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 OTOFQ9HC10 1997 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 DENND2AQ9ULE3 1009 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 AKAP2Q9Y2D5 859 aa21.93■■□□□ 1.1
DDX56-207ENST00000448192 A0A1B0GUL7 405 aa21.92■■□□□ 1.1
DDX56-207ENST00000448192 SEMA3EO15041 775 aa21.92■■□□□ 1.1
DDX56-207ENST00000448192 TM4SF4P48230 202 aa21.92■■□□□ 1.1
DDX56-207ENST00000448192 SREBF2Q12772 1141 aa21.92■■□□□ 1.1
DDX56-207ENST00000448192 APOBEC3HQ6NTF7 200 aaKnown RBP21.92■■□□□ 1.1
DDX56-207ENST00000448192 LDHBP07195 334 aaKnown RBP21.91■■□□□ 1.1
DDX56-207ENST00000448192 PRDX5P30044 214 aa21.91■■□□□ 1.1
DDX56-207ENST00000448192 G3BP1Q13283 466 aaKnown RBP eCLIP21.91■■□□□ 1.1
DDX56-207ENST00000448192 DGKZQ13574 1117 aa21.91■■□□□ 1.1
DDX56-207ENST00000448192 ITPRIPQ8IWB1 547 aa21.91■■□□□ 1.1
DDX56-207ENST00000448192 XAGE2Q96GT9 111 aa21.91■■□□□ 1.1
DDX56-207ENST00000448192 NEUROD6Q96NK8 337 aa21.91■■□□□ 1.1
DDX56-207ENST00000448192 UNCXA6NJT0 531 aa21.9■■□□□ 1.1
DDX56-207ENST00000448192 DIXDC1Q155Q3 683 aa21.9■■□□□ 1.1
DDX56-207ENST00000448192 ANKRD13AQ8IZ07 590 aa21.9■■□□□ 1.1
DDX56-207ENST00000448192 WNK4Q96J92 1243 aa21.9■■□□□ 1.1
DDX56-207ENST00000448192 MCOLN1Q9GZU1 580 aa21.9■■□□□ 1.1
DDX56-207ENST00000448192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.9■■□□□ 1.1
DDX56-207ENST00000448192 MYH2Q9UKX2 1941 aa21.89■■□□□ 1.09
DDX56-207ENST00000448192 TBC1D8O95759 1140 aa21.89■■□□□ 1.09
DDX56-207ENST00000448192 RLBP1P12271 317 aa21.89■■□□□ 1.09
DDX56-207ENST00000448192 C1orf115Q9H7X2 142 aa21.89■■□□□ 1.09
DDX56-207ENST00000448192 DAGLAQ9Y4D2 1042 aa21.89■■□□□ 1.09
DDX56-207ENST00000448192 AK9Q5TCS8 1911 aa21.88■■□□□ 1.09
DDX56-207ENST00000448192 SALL1Q9NSC2 1324 aa21.88■■□□□ 1.09
DDX56-207ENST00000448192 ZBTB48P10074 688 aaPredicted RBP21.88■■□□□ 1.09
DDX56-207ENST00000448192 RASGRF1Q13972 1273 aa21.88■■□□□ 1.09
DDX56-207ENST00000448192 MVPQ14764 893 aaKnown RBP21.88■■□□□ 1.09
DDX56-207ENST00000448192 GORABQ5T7V8 394 aa21.88■■□□□ 1.09
DDX56-207ENST00000448192 FKBP1CQ5VVH2 108 aa21.88■■□□□ 1.09
DDX56-207ENST00000448192 LAMB1P07942 1786 aa21.87■■□□□ 1.09
DDX56-207ENST00000448192 MANSC4A6NHS7 340 aaPredicted RBP21.87■■□□□ 1.09
DDX56-207ENST00000448192 FAM83AQ86UY5 434 aa21.87■■□□□ 1.09
DDX56-207ENST00000448192 ZGPATQ8N5A5 531 aaKnown RBP21.87■■□□□ 1.09
DDX56-207ENST00000448192 ELP3Q9H9T3 547 aa21.87■■□□□ 1.09
DDX56-207ENST00000448192 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
DDX56-207ENST00000448192 CCDC85CA6NKD9 419 aa21.86■■□□□ 1.09
DDX56-207ENST00000448192 ZBTB7BO15156 539 aaPredicted RBP21.85■■□□□ 1.09
DDX56-207ENST00000448192 INHBEP58166 350 aa21.85■■□□□ 1.09
DDX56-207ENST00000448192 ATP8B2P98198 1209 aa21.85■■□□□ 1.09
DDX56-207ENST00000448192 OS9Q13438 667 aaPredicted RBP21.85■■□□□ 1.09
DDX56-207ENST00000448192 CDC42EP5Q6NZY7 148 aa21.85■■□□□ 1.09
DDX56-207ENST00000448192 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms