RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.77■■■□□ 2.52
PMS1-214ENST00000446877 MS4A4AQ96JQ5 239 aa30.77■■■□□ 2.52
PMS1-214ENST00000446877 TEPSINQ96N21 525 aa30.77■■■□□ 2.52
PMS1-214ENST00000446877 TMEM39BQ9GZU3 492 aa30.77■■■□□ 2.52
PMS1-214ENST00000446877 ZFYVE28Q9HCC9 887 aa30.77■■■□□ 2.52
PMS1-214ENST00000446877 CCL15-CCL14A0A0B4J2E2 113 aa30.76■■■□□ 2.51
PMS1-214ENST00000446877 FRAT2O75474 233 aaPredicted RBP30.76■■■□□ 2.51
PMS1-214ENST00000446877 WDHD1O75717 1129 aaPredicted RBP30.76■■■□□ 2.51
PMS1-214ENST00000446877 CCL15Q16663 113 aa30.76■■■□□ 2.51
PMS1-214ENST00000446877 TMEM106CQ9BVX2 250 aa30.76■■■□□ 2.51
PMS1-214ENST00000446877 PUS3Q9BZE2 481 aaKnown RBP30.76■■■□□ 2.51
PMS1-214ENST00000446877 MKI67P46013 3256 aaKnown RBP30.76■■■□□ 2.51
PMS1-214ENST00000446877 MROH5Q6ZUA9 1318 aa30.75■■■□□ 2.51
PMS1-214ENST00000446877 CENPFP49454 3210 aa30.75■■■□□ 2.51
PMS1-214ENST00000446877 TAF1CQ15572 869 aaPredicted RBP30.75■■■□□ 2.51
PMS1-214ENST00000446877 BRI3BPQ8WY22 251 aa30.75■■■□□ 2.51
PMS1-214ENST00000446877 CACNA1FO60840 1977 aa30.74■■■□□ 2.51
PMS1-214ENST00000446877 VGLL4Q14135 290 aa30.74■■■□□ 2.51
PMS1-214ENST00000446877 CDAN1Q8IWY9 1227 aa30.74■■■□□ 2.51
PMS1-214ENST00000446877 CNKSR2Q8WXI2 1034 aa30.74■■■□□ 2.51
PMS1-214ENST00000446877 SUCLG2Q96I99 432 aa30.74■■■□□ 2.51
PMS1-214ENST00000446877 CHAF1AQ13111 956 aaPredicted RBP30.73■■■□□ 2.51
PMS1-214ENST00000446877 CAVIN4Q5BKX8 364 aa30.73■■■□□ 2.51
PMS1-214ENST00000446877 NBPF11Q86T75 865 aa30.73■■■□□ 2.51
PMS1-214ENST00000446877 TBC1D22AQ8WUA7 517 aa30.73■■■□□ 2.51
PMS1-214ENST00000446877 RIPOR2Q9Y4F9 1068 aa30.73■■■□□ 2.51
PMS1-214ENST00000446877 ECM29Q5VYK3 1845 aa30.73■■■□□ 2.51
PMS1-214ENST00000446877 EN2P19622 333 aaPredicted RBP30.72■■■□□ 2.51
PMS1-214ENST00000446877 HDLBPQ00341 1268 aaKnown RBP30.72■■■□□ 2.51
PMS1-214ENST00000446877 FBXO33Q7Z6M2 555 aa30.72■■■□□ 2.51
PMS1-214ENST00000446877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.72■■■□□ 2.51
PMS1-214ENST00000446877 OTUD5Q96G74 571 aa30.72■■■□□ 2.51
PMS1-214ENST00000446877 SPINK5Q9NQ38 1064 aaPredicted RBP30.72■■■□□ 2.51
PMS1-214ENST00000446877 IQSEC3Q9UPP2 1182 aaPredicted RBP30.72■■■□□ 2.51
PMS1-214ENST00000446877 SLC9C1Q4G0N8 1177 aa30.7■■■□□ 2.51
PMS1-214ENST00000446877 METTL24Q5JXM2 366 aa30.7■■■□□ 2.51
PMS1-214ENST00000446877 TEKT1Q969V4 418 aa30.7■■■□□ 2.51
PMS1-214ENST00000446877 KAZALD1Q96I82 304 aa30.7■■■□□ 2.51
PMS1-214ENST00000446877 TMOD2Q9NZR1 351 aa30.7■■■□□ 2.51
PMS1-214ENST00000446877 NBPF7P0C2Y1 421 aaPredicted RBP30.69■■■□□ 2.5
PMS1-214ENST00000446877 HABP4Q5JVS0 413 aaKnown RBP30.69■■■□□ 2.5
PMS1-214ENST00000446877 HOOK2Q96ED9 719 aa30.69■■■□□ 2.5
PMS1-214ENST00000446877 ANP32CO43423 234 aa30.68■■■□□ 2.5
PMS1-214ENST00000446877 CAP1Q01518 475 aa30.68■■■□□ 2.5
PMS1-214ENST00000446877 GRIK5Q16478 980 aa30.68■■■□□ 2.5
PMS1-214ENST00000446877 FAM43AQ8N2R8 423 aa30.68■■■□□ 2.5
PMS1-214ENST00000446877 ZNF333Q96JL9 665 aa30.68■■■□□ 2.5
PMS1-214ENST00000446877 A0A1B0GUL6 1792 aa30.67■■■□□ 2.5
PMS1-214ENST00000446877 BICC1Q9H694 974 aaKnown RBP30.67■■■□□ 2.5
PMS1-214ENST00000446877 KIAA0100Q14667 2235 aaKnown RBP30.67■■■□□ 2.5
PMS1-214ENST00000446877 SPDYE5A6NIY4 337 aa30.66■■■□□ 2.5
PMS1-214ENST00000446877 CETPP11597 493 aa30.66■■■□□ 2.5
PMS1-214ENST00000446877 CACNB3P54284 484 aa30.66■■■□□ 2.5
PMS1-214ENST00000446877 KIF22Q14807 665 aa30.66■■■□□ 2.5
PMS1-214ENST00000446877 PTCH2Q9Y6C5 1203 aa30.66■■■□□ 2.5
PMS1-214ENST00000446877 PDE8BO95263 885 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 SLC4A8Q2Y0W8 1093 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 LRRC24Q50LG9 513 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 ERO1BQ86YB8 467 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 WRNIP1Q96S55 665 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 MRIQ9BWK5 157 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 UTYO14607 1347 aa30.65■■■□□ 2.5
PMS1-214ENST00000446877 RABL6Q3YEC7 729 aaPredicted RBP30.64■■■□□ 2.5
PMS1-214ENST00000446877 FAM83AQ86UY5 434 aa30.64■■■□□ 2.5
PMS1-214ENST00000446877 ZDHHC15Q96MV8 337 aa30.64■■■□□ 2.5
PMS1-214ENST00000446877 SNAPC2Q13487 334 aa30.63■■■□□ 2.49
PMS1-214ENST00000446877 FKBP1CQ5VVH2 108 aa30.63■■■□□ 2.49
PMS1-214ENST00000446877 ZCCHC17Q9NP64 241 aaKnown RBP30.63■■■□□ 2.49
PMS1-214ENST00000446877 LAMB1P07942 1786 aa30.63■■■□□ 2.49
PMS1-214ENST00000446877 TLR2O60603 784 aa30.62■■■□□ 2.49
PMS1-214ENST00000446877 BCAMP50895 628 aa30.62■■■□□ 2.49
PMS1-214ENST00000446877 ZKSCAN4Q969J2 545 aaPredicted RBP30.62■■■□□ 2.49
PMS1-214ENST00000446877 SUGT1Q9Y2Z0 365 aa30.62■■■□□ 2.49
PMS1-214ENST00000446877 SNCAIPQ9Y6H5 919 aa30.62■■■□□ 2.49
PMS1-214ENST00000446877 MAST3O60307 1309 aa30.62■■■□□ 2.49
PMS1-214ENST00000446877 BRCA2P51587 3418 aa30.61■■■□□ 2.49
PMS1-214ENST00000446877 DCAF15Q66K64 600 aa30.61■■■□□ 2.49
PMS1-214ENST00000446877 IFIT1P09914 478 aaKnown RBP30.6■■■□□ 2.49
PMS1-214ENST00000446877 APOBEC3HQ6NTF7 200 aaKnown RBP30.6■■■□□ 2.49
PMS1-214ENST00000446877 BTBD19C9JJ37 291 aa30.59■■■□□ 2.49
PMS1-214ENST00000446877 IRF6O14896 467 aa30.59■■■□□ 2.49
PMS1-214ENST00000446877 MYCP01106 439 aaPredicted RBP30.59■■■□□ 2.49
PMS1-214ENST00000446877 ANKRD44Q8N8A2 993 aa30.59■■■□□ 2.49
PMS1-214ENST00000446877 VGLL2Q8N8G2 317 aa30.59■■■□□ 2.49
PMS1-214ENST00000446877 GNRH1P01148 92 aa30.58■■■□□ 2.49
PMS1-214ENST00000446877 LACTBP83111 547 aaPredicted RBP30.58■■■□□ 2.49
PMS1-214ENST00000446877 PPIL2Q13356 520 aa30.58■■■□□ 2.49
PMS1-214ENST00000446877 HHIPL2Q6UWX4 724 aa30.58■■■□□ 2.49
PMS1-214ENST00000446877 ZNF341Q9BYN7 854 aa30.58■■■□□ 2.49
PMS1-214ENST00000446877 PUM3Q15397 648 aaKnown RBP30.57■■■□□ 2.48
PMS1-214ENST00000446877 FAM9BQ8IZU0 186 aa30.57■■■□□ 2.48
PMS1-214ENST00000446877 OTOFQ9HC10 1997 aa30.57■■■□□ 2.48
PMS1-214ENST00000446877 KLHDC4Q8TBB5 520 aa30.56■■■□□ 2.48
PMS1-214ENST00000446877 SH3TC2Q8TF17 1288 aa30.56■■■□□ 2.48
PMS1-214ENST00000446877 KIF16BQ96L93 1317 aa30.55■■■□□ 2.48
PMS1-214ENST00000446877 PRMT2P55345 433 aa30.55■■■□□ 2.48
PMS1-214ENST00000446877 PPATQ06203 517 aa30.55■■■□□ 2.48
PMS1-214ENST00000446877 MIGA2Q7L4E1 593 aa30.55■■■□□ 2.48
PMS1-214ENST00000446877 ARHGAP39Q9C0H5 1083 aa30.55■■■□□ 2.48
PMS1-214ENST00000446877 ZEB1P37275 1124 aaPredicted RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms