RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
SF3A1-203ENST00000444440 NBPF12Q5TAG4 269 aaPredicted RBP13.56□□□□□ -0.24
SF3A1-203ENST00000444440 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
SF3A1-203ENST00000444440 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
SF3A1-203ENST00000444440 ZNF70Q9UC06 446 aaPredicted RBP13.56□□□□□ -0.24
SF3A1-203ENST00000444440 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
SF3A1-203ENST00000444440 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
SF3A1-203ENST00000444440 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
SF3A1-203ENST00000444440 GNAI3P08754 354 aa13.55□□□□□ -0.24
SF3A1-203ENST00000444440 PHKA1P46020 1223 aa13.55□□□□□ -0.24
SF3A1-203ENST00000444440 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
SF3A1-203ENST00000444440 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
SF3A1-203ENST00000444440 RASA3Q14644 834 aa13.55□□□□□ -0.24
SF3A1-203ENST00000444440 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
SF3A1-203ENST00000444440 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
SF3A1-203ENST00000444440 CENPFP49454 3210 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
SF3A1-203ENST00000444440 IL15P40933 162 aaPredicted RBP13.54□□□□□ -0.24
SF3A1-203ENST00000444440 CACNB3P54284 484 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 TIMM10P62072 90 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 TEPSINQ96N21 525 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 C1orf115Q9H7X2 142 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 RNF186Q9NXI6 227 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
SF3A1-203ENST00000444440 FOCADQ5VW36 1801 aa13.54□□□□□ -0.24
SF3A1-203ENST00000444440 TCP10L2B9ZVM9 353 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 MYO1BO43795 1136 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 PRDX5P30044 214 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 TFCP2Q12800 502 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 PHIPQ8WWQ0 1821 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
SF3A1-203ENST00000444440 TRPA1O75762 1119 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 GNAI2P04899 355 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 NF2P35240 595 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
SF3A1-203ENST00000444440 ARMC9Q7Z3E5 817 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 TMEM39BQ9GZU3 492 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-203ENST00000444440 PPP2R3BQ9Y5P8 575 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 ZSWIM8A7E2V4 1837 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 PTPRFP10586 1907 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 HTTP42858 3142 aa13.52□□□□□ -0.25
SF3A1-203ENST00000444440 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 CA12O43570 354 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
SF3A1-203ENST00000444440 GJA5P36382 358 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 HDLBPQ00341 1268 aaKnown RBP13.51□□□□□ -0.25
SF3A1-203ENST00000444440 DIXDC1Q155Q3 683 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 CCDC102BQ68D86 513 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 ZDHHC15Q96MV8 337 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
SF3A1-203ENST00000444440 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
SF3A1-203ENST00000444440 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
SF3A1-203ENST00000444440 SAGE1Q9NXZ1 904 aa13.5□□□□□ -0.25
SF3A1-203ENST00000444440 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
SF3A1-203ENST00000444440 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
SF3A1-203ENST00000444440 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 POLA2Q14181 598 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 SPRYD7Q5W111 196 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 WDR66Q8TBY9 1149 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 WNK4Q96J92 1243 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 MRIQ9BWK5 157 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 R3HDMLQ9H3Y0 253 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 SUGT1Q9Y2Z0 365 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 BRCA2P51587 3418 aa13.49□□□□□ -0.25
SF3A1-203ENST00000444440 DOCK1Q14185 1865 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 MAST3O60307 1309 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 TM4SF4P48230 202 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 SSH3Q8TE77 659 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 ZNF384Q8TF68 577 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 DENND2AQ9ULE3 1009 aa13.48□□□□□ -0.25
SF3A1-203ENST00000444440 ZBTB22O15209 634 aa13.47□□□□□ -0.25
SF3A1-203ENST00000444440 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
SF3A1-203ENST00000444440 ATP8B2P98198 1209 aa13.47□□□□□ -0.25
SF3A1-203ENST00000444440 NFIAQ12857 509 aa13.47□□□□□ -0.25
SF3A1-203ENST00000444440 CDC42EP5Q6NZY7 148 aa13.47□□□□□ -0.25
SF3A1-203ENST00000444440 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
SF3A1-203ENST00000444440 FTSJ3Q8IY81 847 aaKnown RBP13.47□□□□□ -0.25
SF3A1-203ENST00000444440 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
SF3A1-203ENST00000444440 RFX7Q2KHR2 1363 aa13.46□□□□□ -0.25
SF3A1-203ENST00000444440 SEMA3EO15041 775 aa13.46□□□□□ -0.25
SF3A1-203ENST00000444440 TBC1D8O95759 1140 aa13.46□□□□□ -0.25
SF3A1-203ENST00000444440 LDHBP07195 334 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms