RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 UBE2Q2LH0YL09 131 aa16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 ZBTB22O15209 634 aa16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 RLBP1P12271 317 aa16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
AP001062.3-202ENST00000444409 SSC5DA1L4H1 1573 aa16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 TEKT1Q969V4 418 aa16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 TDRD3Q9H7E2 651 aaKnown RBP16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 MYH13Q9UKX3 1938 aa16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 MAST3O60307 1309 aa16.95■□□□□ 0.3
AP001062.3-202ENST00000444409 SEMA3EO15041 775 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 ADORA1P30542 326 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 PHKA1P46020 1223 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 TFCP2Q12800 502 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 TNFAIP1Q13829 316 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 RASA3Q14644 834 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
AP001062.3-202ENST00000444409 A0A1B0GUL7 405 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 TIMM10P62072 90 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 PRKG1Q13976 671 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 MAP3K11Q16584 847 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 SUPT20HL1Q3ZLR7 823 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 TSKSQ9UJT2 592 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 ANGEL1Q9UNK9 670 aaKnown RBP16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 SALL1Q9NSC2 1324 aa16.93■□□□□ 0.3
AP001062.3-202ENST00000444409 POLA2Q14181 598 aa16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 HHIPL2Q6UWX4 724 aa16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 CSRNP1Q96S65 589 aa16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
AP001062.3-202ENST00000444409 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 PRDX5P30044 214 aa16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 XAGE2Q96GT9 111 aa16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 TEPSINQ96N21 525 aa16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
AP001062.3-202ENST00000444409 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 TCP10L2B9ZVM9 353 aa16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 TNNI2P48788 182 aa16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
AP001062.3-202ENST00000444409 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
AP001062.3-202ENST00000444409 USP2O75604 605 aaPredicted RBP16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 LDHBP07195 334 aaKnown RBP16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 MS4A1P11836 297 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 CACNB3P54284 484 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 DIXDC1Q155Q3 683 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 CDAN1Q8IWY9 1227 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
AP001062.3-202ENST00000444409 TRPA1O75762 1119 aa16.87■□□□□ 0.29
AP001062.3-202ENST00000444409 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
AP001062.3-202ENST00000444409 SPRYD7Q5W111 196 aa16.87■□□□□ 0.29
AP001062.3-202ENST00000444409 FAM83AQ86UY5 434 aa16.87■□□□□ 0.29
AP001062.3-202ENST00000444409 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
AP001062.3-202ENST00000444409 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 SURF6O75683 361 aaKnown RBP16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 TM4SF4P48230 202 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 CEP85Q6P2H3 762 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 CLMNQ96JQ2 1002 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 GPR108Q9NPR9 543 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
AP001062.3-202ENST00000444409 ZBTB48P10074 688 aaPredicted RBP16.85■□□□□ 0.29
AP001062.3-202ENST00000444409 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
AP001062.3-202ENST00000444409 MKRN3Q13064 507 aaKnown RBP16.85■□□□□ 0.29
AP001062.3-202ENST00000444409 GORABQ5T7V8 394 aa16.85■□□□□ 0.29
AP001062.3-202ENST00000444409 ANKRD13AQ8IZ07 590 aa16.85■□□□□ 0.29
AP001062.3-202ENST00000444409 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
AP001062.3-202ENST00000444409 SREBF2Q12772 1141 aa16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 CDC42EP5Q6NZY7 148 aa16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 WNK4Q96J92 1243 aa16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 HMG20BQ9P0W2 317 aa16.84■□□□□ 0.29
AP001062.3-202ENST00000444409 ABCF2Q9UG63 623 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms