RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 FAM205AQ6ZU69 1335 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 LAMA3Q16787 3333 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 TRIOBPQ9H2D6 2365 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 CEP290O15078 2479 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 DLL1O00548 723 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 CETPP11597 493 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 TNNI2P48788 182 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
SYN3-204ENST00000441821 G2E3Q7L622 706 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
SYN3-204ENST00000441821 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
SYN3-204ENST00000441821 A0A1B0GUL6 1792 aa12.76□□□□□ -0.37
SYN3-204ENST00000441821 TCP10L2B9ZVM9 353 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 MTFR1Q15390 333 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 ERO1BQ86YB8 467 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
SYN3-204ENST00000441821 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 FOXO4P98177 505 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 SNAPC2Q13487 334 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 C17orf99Q6UX52 265 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 TDRD7Q8NHU6 1098 aaKnown RBP12.74□□□□□ -0.37
SYN3-204ENST00000441821 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 SRRDQ9UH36 339 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 SNCAIPQ9Y6H5 919 aa12.74□□□□□ -0.37
SYN3-204ENST00000441821 IRF6O14896 467 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 GJB1P08034 283 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 HOXD10P28358 340 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 CRKP46108 304 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 GJA8P48165 433 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 FLIIQ13045 1269 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
SYN3-204ENST00000441821 PLIN1O60240 522 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 CTGFP29279 349 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 HIBADHP31937 336 aaKnown RBP12.72□□□□□ -0.37
SYN3-204ENST00000441821 GRK4P32298 578 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 PSMC4P43686 418 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 PPIL2Q13356 520 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 UBE4AQ14139 1066 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
SYN3-204ENST00000441821 LDHAL6AQ6ZMR3 332 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 TSR2Q969E8 191 aaKnown RBP12.72□□□□□ -0.37
SYN3-204ENST00000441821 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 NR2E3Q9Y5X4 410 aa12.72□□□□□ -0.37
SYN3-204ENST00000441821 A0A1W2PPC1 479 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 CCL5P13501 91 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 OSBPP22059 807 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
SYN3-204ENST00000441821 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
SYN3-204ENST00000441821 CCDC57Q2TAC2 916 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
SYN3-204ENST00000441821 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 FAM84BQ96KN1 310 aaPredicted RBP12.71□□□□□ -0.37
SYN3-204ENST00000441821 TRIM47Q96LD4 638 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 CNNM1Q9NRU3 951 aa12.71□□□□□ -0.37
SYN3-204ENST00000441821 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.38
SYN3-204ENST00000441821 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
SYN3-204ENST00000441821 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
SYN3-204ENST00000441821 GYG1P46976 350 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 PPATQ06203 517 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 ZNF594Q96JF6 807 aaPredicted RBP12.7□□□□□ -0.38
SYN3-204ENST00000441821 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 CPA4Q9UI42 421 aa12.7□□□□□ -0.38
SYN3-204ENST00000441821 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
SYN3-204ENST00000441821 ADGRA2Q96PE1 1338 aa12.69□□□□□ -0.38
SYN3-204ENST00000441821 UBXN2AP68543 259 aa12.69□□□□□ -0.38
SYN3-204ENST00000441821 DDX10Q13206 875 aaKnown RBP12.69□□□□□ -0.38
SYN3-204ENST00000441821 FKBP1CQ5VVH2 108 aa12.69□□□□□ -0.38
SYN3-204ENST00000441821 MRIQ9BWK5 157 aa12.69□□□□□ -0.38
SYN3-204ENST00000441821 PDHXO00330 501 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
SYN3-204ENST00000441821 CAPN2P17655 700 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 CACNB3P54284 484 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 GRIK5Q16478 980 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 EPHA10Q5JZY3 1008 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 DCAF15Q66K64 600 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
SYN3-204ENST00000441821 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 TEKT1Q969V4 418 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 ZDHHC15Q96MV8 337 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 TMOD2Q9NZR1 351 aa12.68□□□□□ -0.38
SYN3-204ENST00000441821 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
SYN3-204ENST00000441821 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms