RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 TNNI2P48788 182 aa17.94■□□□□ 0.46
PTPRN-205ENST00000440552 MAP3K9P80192 1104 aa17.94■□□□□ 0.46
PTPRN-205ENST00000440552 HDLBPQ00341 1268 aaKnown RBP17.94■□□□□ 0.46
PTPRN-205ENST00000440552 BRI3BPQ8WY22 251 aa17.94■□□□□ 0.46
PTPRN-205ENST00000440552 C9orf78Q9NZ63 289 aaPredicted RBP17.94■□□□□ 0.46
PTPRN-205ENST00000440552 MKI67P46013 3256 aaKnown RBP17.93■□□□□ 0.46
PTPRN-205ENST00000440552 CRKP46108 304 aa17.93■□□□□ 0.46
PTPRN-205ENST00000440552 GTF2A2P52657 109 aa17.93■□□□□ 0.46
PTPRN-205ENST00000440552 CAP1Q01518 475 aa17.93■□□□□ 0.46
PTPRN-205ENST00000440552 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
PTPRN-205ENST00000440552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPRN-205ENST00000440552 VGLL4Q14135 290 aa17.92■□□□□ 0.46
PTPRN-205ENST00000440552 FBXO33Q7Z6M2 555 aa17.92■□□□□ 0.46
PTPRN-205ENST00000440552 CDAN1Q8IWY9 1227 aa17.92■□□□□ 0.46
PTPRN-205ENST00000440552 ZFYVE28Q9HCC9 887 aa17.92■□□□□ 0.46
PTPRN-205ENST00000440552 RIPOR2Q9Y4F9 1068 aa17.92■□□□□ 0.46
PTPRN-205ENST00000440552 MROH5Q6ZUA9 1318 aa17.92■□□□□ 0.46
PTPRN-205ENST00000440552 CCL15-CCL14A0A0B4J2E2 113 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 EN2P19622 333 aaPredicted RBP17.91■□□□□ 0.46
PTPRN-205ENST00000440552 TAF1CQ15572 869 aaPredicted RBP17.91■□□□□ 0.46
PTPRN-205ENST00000440552 CCL15Q16663 113 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 TBC1D22AQ8WUA7 517 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 ZNF333Q96JL9 665 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 MRIQ9BWK5 157 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 SRCIN1Q9C0H9 1055 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 TMEM39BQ9GZU3 492 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
PTPRN-205ENST00000440552 CSADQ9Y600 493 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 CENPFP49454 3210 aa17.91■□□□□ 0.46
PTPRN-205ENST00000440552 SPDYE5A6NIY4 337 aa17.9■□□□□ 0.46
PTPRN-205ENST00000440552 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
PTPRN-205ENST00000440552 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
PTPRN-205ENST00000440552 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
PTPRN-205ENST00000440552 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
PTPRN-205ENST00000440552 UTYO14607 1347 aa17.9■□□□□ 0.46
PTPRN-205ENST00000440552 WDHD1O75717 1129 aaPredicted RBP17.89■□□□□ 0.45
PTPRN-205ENST00000440552 FKBP1CQ5VVH2 108 aa17.89■□□□□ 0.45
PTPRN-205ENST00000440552 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
PTPRN-205ENST00000440552 SUCLG2Q96I99 432 aa17.89■□□□□ 0.45
PTPRN-205ENST00000440552 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
PTPRN-205ENST00000440552 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
PTPRN-205ENST00000440552 GRIK5Q16478 980 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
PTPRN-205ENST00000440552 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 VPS37DQ86XT2 251 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 TEKT1Q969V4 418 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 HOOK2Q96ED9 719 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 OTUD5Q96G74 571 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 ZDHHC15Q96MV8 337 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 PTCH2Q9Y6C5 1203 aa17.88■□□□□ 0.45
PTPRN-205ENST00000440552 CETPP11597 493 aa17.87■□□□□ 0.45
PTPRN-205ENST00000440552 SLC9C1Q4G0N8 1177 aa17.87■□□□□ 0.45
PTPRN-205ENST00000440552 CAVIN4Q5BKX8 364 aa17.87■□□□□ 0.45
PTPRN-205ENST00000440552 ERO1BQ86YB8 467 aa17.87■□□□□ 0.45
PTPRN-205ENST00000440552 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
PTPRN-205ENST00000440552 SNCAIPQ9Y6H5 919 aa17.87■□□□□ 0.45
PTPRN-205ENST00000440552 TLR2O60603 784 aa17.86■□□□□ 0.45
PTPRN-205ENST00000440552 GNRH1P01148 92 aa17.86■□□□□ 0.45
PTPRN-205ENST00000440552 NBPF7P0C2Y1 421 aaPredicted RBP17.86■□□□□ 0.45
PTPRN-205ENST00000440552 VGLL2Q8N8G2 317 aa17.86■□□□□ 0.45
PTPRN-205ENST00000440552 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
PTPRN-205ENST00000440552 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
PTPRN-205ENST00000440552 TRIOBPQ9H2D6 2365 aa17.86■□□□□ 0.45
PTPRN-205ENST00000440552 BRCA2P51587 3418 aa17.85■□□□□ 0.45
PTPRN-205ENST00000440552 MAST3O60307 1309 aa17.85■□□□□ 0.45
PTPRN-205ENST00000440552 PDE8BO95263 885 aa17.85■□□□□ 0.45
PTPRN-205ENST00000440552 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
PTPRN-205ENST00000440552 PPIL2Q13356 520 aa17.85■□□□□ 0.45
PTPRN-205ENST00000440552 SNAPC2Q13487 334 aa17.85■□□□□ 0.45
PTPRN-205ENST00000440552 METTL24Q5JXM2 366 aa17.85■□□□□ 0.45
PTPRN-205ENST00000440552 RPAP1Q9BWH6 1393 aaPredicted RBP17.85■□□□□ 0.45
PTPRN-205ENST00000440552 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
PTPRN-205ENST00000440552 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-205ENST00000440552 PRMT2P55345 433 aa17.84■□□□□ 0.45
PTPRN-205ENST00000440552 LACTBP83111 547 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-205ENST00000440552 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
PTPRN-205ENST00000440552 HHIPL2Q6UWX4 724 aa17.84■□□□□ 0.45
PTPRN-205ENST00000440552 ANKRD44Q8N8A2 993 aa17.84■□□□□ 0.45
PTPRN-205ENST00000440552 WRNIP1Q96S55 665 aa17.84■□□□□ 0.45
PTPRN-205ENST00000440552 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-205ENST00000440552 BTBD19C9JJ37 291 aa17.83■□□□□ 0.44
PTPRN-205ENST00000440552 IRF6O14896 467 aa17.83■□□□□ 0.44
PTPRN-205ENST00000440552 CACNB3P54284 484 aa17.83■□□□□ 0.44
PTPRN-205ENST00000440552 KIF22Q14807 665 aa17.83■□□□□ 0.44
PTPRN-205ENST00000440552 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
PTPRN-205ENST00000440552 DCAF15Q66K64 600 aa17.83■□□□□ 0.44
PTPRN-205ENST00000440552 PPATQ06203 517 aa17.82■□□□□ 0.44
PTPRN-205ENST00000440552 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
PTPRN-205ENST00000440552 ZKSCAN4Q969J2 545 aaPredicted RBP17.82■□□□□ 0.44
PTPRN-205ENST00000440552 FGFR2P21802 821 aa17.81■□□□□ 0.44
PTPRN-205ENST00000440552 BCAMP50895 628 aa17.81■□□□□ 0.44
PTPRN-205ENST00000440552 FXR1P51114 621 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPRN-205ENST00000440552 ZNF341Q9BYN7 854 aa17.81■□□□□ 0.44
PTPRN-205ENST00000440552 ARHGAP39Q9C0H5 1083 aa17.81■□□□□ 0.44
PTPRN-205ENST00000440552 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
PTPRN-205ENST00000440552 PUM3Q15397 648 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms