RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 RFC4P35249 363 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 SLC9C2Q5TAH2 1124 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 PROM2Q8N271 834 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
ACTN4-204ENST00000440400 SALL1Q9NSC2 1324 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 UQCRHP07919 91 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 ZSCAN22P10073 491 aaPredicted RBP15.59■□□□□ 0.09
ACTN4-204ENST00000440400 RPS8P62241 208 aaKnown RBP15.59■□□□□ 0.09
ACTN4-204ENST00000440400 BCAMP50895 628 aa15.59■□□□□ 0.09
ACTN4-204ENST00000440400 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 SYT1P21579 422 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 Q6ZUG5 572 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.08
ACTN4-204ENST00000440400 CCDC83Q8IWF9 413 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 ZNF274Q96GC6 653 aaPredicted RBP15.58■□□□□ 0.08
ACTN4-204ENST00000440400 ZNF646O15015 1829 aaPredicted RBP15.58■□□□□ 0.08
ACTN4-204ENST00000440400 STX6O43752 255 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 MAP3K12Q12852 859 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 FAM84BQ96KN1 310 aaPredicted RBP15.58■□□□□ 0.08
ACTN4-204ENST00000440400 SMC3Q9UQE7 1217 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 MTMR6Q9Y217 621 aa15.58■□□□□ 0.08
ACTN4-204ENST00000440400 GJB2P29033 226 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 IMMTQ16891 758 aaKnown RBP15.57■□□□□ 0.08
ACTN4-204ENST00000440400 NOL8Q76FK4 1167 aaKnown RBP15.57■□□□□ 0.08
ACTN4-204ENST00000440400 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 GNAT2P19087 354 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 GRAPQ13588 217 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 GRAPLQ8TC17 118 aaPredicted RBP15.57■□□□□ 0.08
ACTN4-204ENST00000440400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
ACTN4-204ENST00000440400 SNAP23O00161 211 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 WASHC4Q2M389 1173 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 PRR5LQ6MZQ0 368 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
ACTN4-204ENST00000440400 DENND2AQ9ULE3 1009 aa15.57■□□□□ 0.08
ACTN4-204ENST00000440400 FOCADQ5VW36 1801 aa15.56■□□□□ 0.08
ACTN4-204ENST00000440400 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
ACTN4-204ENST00000440400 PATL2C9JE40 543 aaKnown RBP15.56■□□□□ 0.08
ACTN4-204ENST00000440400 F13A1P00488 732 aa15.56■□□□□ 0.08
ACTN4-204ENST00000440400 TTLL5Q6EMB2 1281 aa15.56■□□□□ 0.08
ACTN4-204ENST00000440400 MAP7D2Q96T17 732 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 EPB41L4AQ9HCS5 686 aaPredicted RBP15.55■□□□□ 0.08
ACTN4-204ENST00000440400 GNL3LQ9NVN8 582 aaKnown RBP15.55■□□□□ 0.08
ACTN4-204ENST00000440400 CDK5RAP2Q96SN8 1893 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 VGLL3A8MV65 326 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 ANTXR2P58335 489 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 POLRMTO00411 1230 aaKnown RBP15.55■□□□□ 0.08
ACTN4-204ENST00000440400 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 MTA3Q9BTC8 594 aa15.55■□□□□ 0.08
ACTN4-204ENST00000440400 SRCAPQ6ZRS2 3230 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 TXNRD1Q16881 649 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 CHMP4CQ96CF2 233 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 LARP6Q9BRS8 491 aaKnown RBP15.54■□□□□ 0.08
ACTN4-204ENST00000440400 ANAPC4Q9UJX5 808 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 SCRN1Q12765 414 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 MAGEB6Q8N7X4 407 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 NECAB1Q8N987 351 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
ACTN4-204ENST00000440400 GSG1L2A8MUP6 293 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 IDH1O75874 414 aaKnown RBP15.53■□□□□ 0.08
ACTN4-204ENST00000440400 PDCP20941 246 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 GOLGB1Q14789 3259 aaKnown RBP15.53■□□□□ 0.08
ACTN4-204ENST00000440400 TCHHQ07283 1943 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 CTDNEP1O95476 244 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 NCOA7Q8NI08 942 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 ZNF384Q8TF68 577 aa15.53■□□□□ 0.08
ACTN4-204ENST00000440400 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
ACTN4-204ENST00000440400 TRIM37O94972 964 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 NASPP49321 788 aaPredicted RBP15.52■□□□□ 0.08
ACTN4-204ENST00000440400 GPT2Q8TD30 523 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 TCEANC2Q96MN5 208 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 ZNF213O14771 459 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 GYG1P46976 350 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 ZNF445P59923 1031 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 DDR1Q08345 913 aa15.52■□□□□ 0.08
ACTN4-204ENST00000440400 PDIA3P30101 505 aaKnown RBP15.52■□□□□ 0.07
ACTN4-204ENST00000440400 MCM5P33992 734 aa15.52■□□□□ 0.07
ACTN4-204ENST00000440400 GIMAP6Q6P9H5 292 aa15.52■□□□□ 0.07
ACTN4-204ENST00000440400 IFNL3Q8IZI9 196 aa15.52■□□□□ 0.07
ACTN4-204ENST00000440400 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.07
ACTN4-204ENST00000440400 NSUN7Q8NE18 718 aaKnown RBP15.52■□□□□ 0.07
ACTN4-204ENST00000440400 BRF1Q92994 677 aa15.52■□□□□ 0.07
ACTN4-204ENST00000440400 NAV1Q8NEY1 1877 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 WTIPA6NIX2 430 aaPredicted RBP15.51■□□□□ 0.07
ACTN4-204ENST00000440400 PHF14O94880 888 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 FGRP09769 529 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 STAG1Q8WVM7 1258 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 CRAMP1Q96RY5 1269 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 ATP6V1DQ9Y5K8 247 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 ADGRA1Q86SQ6 560 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 ANP32BQ92688 251 aaKnown RBP15.51■□□□□ 0.07
ACTN4-204ENST00000440400 AIDAQ96BJ3 306 aa15.51■□□□□ 0.07
ACTN4-204ENST00000440400 MBD4O95243 580 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 MBD3O95983 291 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms