RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
TNFRSF1A-204ENST00000440083 RBM46Q8TBY0 533 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1A-204ENST00000440083 GNL3LQ9NVN8 582 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1A-204ENST00000440083 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
TNFRSF1A-204ENST00000440083 PCDHAC2Q9Y5I4 1007 aa17.63■□□□□ 0.41
TNFRSF1A-204ENST00000440083 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
TNFRSF1A-204ENST00000440083 ERC2O15083 957 aa17.62■□□□□ 0.41
TNFRSF1A-204ENST00000440083 KIF4BQ2VIQ3 1234 aa17.62■□□□□ 0.41
TNFRSF1A-204ENST00000440083 MAP1SQ66K74 1059 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-204ENST00000440083 USP50Q70EL3 339 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-204ENST00000440083 PNMA8AQ86V59 439 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-204ENST00000440083 LDHDQ86WU2 507 aa17.62■□□□□ 0.41
TNFRSF1A-204ENST00000440083 FKBP1AP62942 108 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1A-204ENST00000440083 CHADLQ6NUI6 762 aa17.61■□□□□ 0.41
TNFRSF1A-204ENST00000440083 RILPL2Q969X0 211 aa17.61■□□□□ 0.41
TNFRSF1A-204ENST00000440083 MYOZ2Q9NPC6 264 aa17.61■□□□□ 0.41
TNFRSF1A-204ENST00000440083 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 MCAMP43121 646 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 C1QTNF8P60827 252 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 TTC39AQ5SRH9 613 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 SMC1BQ8NDV3 1235 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 SNRKQ9NRH2 765 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 HMG20BQ9P0W2 317 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 DENND2AQ9ULE3 1009 aa17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 TTF2Q9UNY4 1162 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-204ENST00000440083 SEMA3EO15041 775 aa17.59■□□□□ 0.41
TNFRSF1A-204ENST00000440083 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
TNFRSF1A-204ENST00000440083 TBC1D22AQ8WUA7 517 aa17.59■□□□□ 0.41
TNFRSF1A-204ENST00000440083 ECHDC1Q9NTX5 307 aa17.59■□□□□ 0.41
TNFRSF1A-204ENST00000440083 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
TNFRSF1A-204ENST00000440083 REC8O95072 547 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PRDX5P30044 214 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 RBM25P49756 843 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 OGFOD1Q8N543 542 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SPATA5Q8NB90 893 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 WDR66Q8TBY9 1149 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 HDAC9Q9UKV0 1011 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SCAF8Q9UPN6 1271 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
TNFRSF1A-204ENST00000440083 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 FMR1Q06787 632 aaKnown RBP eCLIP17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 CCDC158Q5M9N0 1113 aa17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 DLK2Q6UY11 383 aa17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PI4K2BQ8TCG2 481 aa17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 GGA3Q9NZ52 723 aa17.57■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PDS5AQ29RF7 1337 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-204ENST00000440083 TRAF5O00463 557 aa17.56■□□□□ 0.4
TNFRSF1A-204ENST00000440083 FSTL1Q12841 308 aa17.56■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ZBED3Q96IU2 234 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-204ENST00000440083 GLIS2Q9BZE0 524 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 WNT10BO00744 389 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ZBTB22O15209 634 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 CRKP46108 304 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 RBM5P52756 815 aaKnown RBP eCLIP17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 DLGAP5Q15398 846 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ANGEL2Q5VTE6 544 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ABCF2Q9UG63 623 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PGAP2Q9UHJ9 254 aa17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ADM5C9JUS6 153 aa17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ITGBL1O95965 494 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 LDHBP07195 334 aaKnown RBP17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ZAP70P43403 619 aa17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 USP48Q86UV5 1035 aa17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ZNF512BQ96KM6 892 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PRMT6Q96LA8 375 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 MYO5AQ9Y4I1 1855 aaKnown RBP17.54■□□□□ 0.4
TNFRSF1A-204ENST00000440083 CLRN2A0PK11 232 aa17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 MAP4K4O95819 1239 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 CYP2E1P05181 493 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ESYT1Q9BSJ8 1104 aa17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PIH1D3Q9NQM4 214 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SERPINA10Q9UK55 444 aa17.53■□□□□ 0.4
TNFRSF1A-204ENST00000440083 PASKQ96RG2 1323 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 CHMLP26374 656 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 KRT26Q7Z3Y9 468 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 HSCBQ8IWL3 235 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 MTMR14Q8NCE2 650 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 ZNF384Q8TF68 577 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.4
TNFRSF1A-204ENST00000440083 MCCP23508 829 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ZGPATQ8N5A5 531 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 DAGLAQ9Y4D2 1042 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
TNFRSF1A-204ENST00000440083 MAST3O60307 1309 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms