RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 SLC39A6Q13433 755 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 CCDC150Q8NCX0 1101 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 MARCKSP29966 332 aaPredicted RBP15.7■□□□□ 0.1
PCNX3-202ENST00000439247 ADALQ6DHV7 355 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 MYD88Q99836 296 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.7■□□□□ 0.1
PCNX3-202ENST00000439247 PKD1L3Q7Z443 1732 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 SLC3A2P08195 630 aaKnown RBP15.7■□□□□ 0.1
PCNX3-202ENST00000439247 LINC00301Q8NCQ3 95 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 ZNF202O95125 648 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 ATP5JP18859 108 aa15.7■□□□□ 0.1
PCNX3-202ENST00000439247 LLPHQ9BRT6 129 aaKnown RBP15.7■□□□□ 0.1
PCNX3-202ENST00000439247 LAMA4Q16363 1823 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 GOLIM4O00461 696 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 TADA3O75528 432 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 EVCP57679 992 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 E7EWF7 191 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 OAS2P29728 719 aaKnown RBP15.69■□□□□ 0.1
PCNX3-202ENST00000439247 REXO1L1PQ8IX06 675 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 KDM3BQ7LBC6 1761 aa15.69■□□□□ 0.1
PCNX3-202ENST00000439247 KIF28PB7ZC32 967 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 EXOSC10Q01780 885 aaKnown RBP15.68■□□□□ 0.1
PCNX3-202ENST00000439247 GNL2Q13823 731 aaKnown RBP15.68■□□□□ 0.1
PCNX3-202ENST00000439247 PDIA6Q15084 440 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 WDR24Q96S15 920 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 MROH7-TTC4A0A0A0MT08 1334 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 HAND2P61296 217 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
PCNX3-202ENST00000439247 KRBA2Q6ZNG9 492 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 NGLY1Q96IV0 654 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 ZSWIM4Q9H7M6 989 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 PARP4Q9UKK3 1724 aaKnown RBP15.68■□□□□ 0.1
PCNX3-202ENST00000439247 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 TEX35Q5T0J7 233 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 CHMP4AQ9BY43 222 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 FEZ2Q9UHY8 353 aaPredicted RBP15.68■□□□□ 0.1
PCNX3-202ENST00000439247 LCMT1Q9UIC8 334 aa15.68■□□□□ 0.1
PCNX3-202ENST00000439247 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
PCNX3-202ENST00000439247 SERPINC1P01008 464 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 UBASH3AP57075 661 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 NLRP12P59046 1061 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 NEUROD6Q96NK8 337 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 SLIT2O94813 1529 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 SPTLC2O15270 562 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
PCNX3-202ENST00000439247 PFKFB1P16118 471 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 GCKRQ14397 625 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
PCNX3-202ENST00000439247 UTYO14607 1347 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 VWA3AA6NCI4 1184 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 XAGE3Q8WTP9 111 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 AIFM3Q96NN9 605 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 TIMM10P62072 90 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 PNOCQ13519 176 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 COPS6Q7L5N1 327 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 DCAF5Q96JK2 942 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 ARGLU1Q9NWB6 273 aaPredicted RBP15.66■□□□□ 0.1
PCNX3-202ENST00000439247 DISP2A7MBM2 1401 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 SPATA31A1Q5TZJ5 1347 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 SCN11AQ9UI33 1791 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 TRIM66O15016 1216 aa15.66■□□□□ 0.1
PCNX3-202ENST00000439247 RFX5P48382 616 aaPredicted RBP15.66■□□□□ 0.1
PCNX3-202ENST00000439247 PHLPP2Q6ZVD8 1323 aa15.65■□□□□ 0.1
PCNX3-202ENST00000439247 HSP90AB3PQ58FF7 597 aa15.65■□□□□ 0.1
PCNX3-202ENST00000439247 CC2D1AQ6P1N0 951 aaPredicted RBP15.65■□□□□ 0.1
PCNX3-202ENST00000439247 HOMEZQ8IX15 550 aa15.65■□□□□ 0.1
PCNX3-202ENST00000439247 HAUS7Q99871 368 aa15.65■□□□□ 0.1
PCNX3-202ENST00000439247 IRX2Q9BZI1 471 aaPredicted RBP15.65■□□□□ 0.1
PCNX3-202ENST00000439247 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
PCNX3-202ENST00000439247 SMC1AQ14683 1233 aaKnown RBP15.65■□□□□ 0.1
PCNX3-202ENST00000439247 C8orf76Q96K31 380 aa15.65■□□□□ 0.1
PCNX3-202ENST00000439247 BCL9LQ86UU0 1499 aa15.64■□□□□ 0.1
PCNX3-202ENST00000439247 DDX58O95786 925 aaKnown RBP15.64■□□□□ 0.09
PCNX3-202ENST00000439247 GNG11P61952 73 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
PCNX3-202ENST00000439247 PDILTQ8N807 584 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 DESI2Q9BSY9 194 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 DDX21Q9NR30 783 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCNX3-202ENST00000439247 FANCLQ9NW38 375 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 SIPA1L3O60292 1781 aaPredicted RBP15.64■□□□□ 0.09
PCNX3-202ENST00000439247 A0A1W2PQ27 194 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 A0A1W2PQ64 194 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 A0A1W2PQD8 194 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 MYSM1Q5VVJ2 828 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 TOGARAM2Q6ZUX3 1019 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 CERS3Q8IU89 383 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms