RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
LSMEM1-202ENST00000439068 DPYDQ12882 1025 aa11.68□□□□□ -0.54
LSMEM1-202ENST00000439068 ANKMY2Q8IV38 441 aa11.68□□□□□ -0.54
LSMEM1-202ENST00000439068 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
LSMEM1-202ENST00000439068 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
LSMEM1-202ENST00000439068 SRGNP10124 158 aa11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 GTF2IP78347 998 aa11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 PRPF40BQ6NWY9 871 aaKnown RBP11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 PNMA8AQ86V59 439 aaPredicted RBP11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 ZNF496Q96IT1 587 aaPredicted RBP11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 ZNF652Q9Y2D9 606 aa11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 TLL2Q9Y6L7 1015 aa11.67□□□□□ -0.54
LSMEM1-202ENST00000439068 ERVH48-1M5A8F1 160 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 FOXN1O15353 648 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 SLC19A1P41440 591 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 SCTRP47872 440 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 EAPPQ56P03 285 aaPredicted RBP11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 CLEC4GQ6UXB4 293 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 TPTE2Q6XPS3 522 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 TRIM50Q86XT4 487 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 RTKN2Q8IZC4 609 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 TAF1DQ9H5J8 278 aaPredicted RBP11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 PCDHGA11Q9Y5H2 935 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
LSMEM1-202ENST00000439068 U2SURPO15042 1029 aaKnown RBP11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 SIAH2O43255 324 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 DKK1O94907 266 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 BRD1O95696 1058 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 A1BGP04217 495 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 NPR1P16066 1061 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 ALDH1B1P30837 517 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 GRM5P41594 1212 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 DEFB115Q30KQ5 88 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 TJP1Q07157 1748 aa11.65□□□□□ -0.54
LSMEM1-202ENST00000439068 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 VEGFBP49765 207 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 TMPRSS4Q9NRS4 437 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 MAP4K5Q9Y4K4 846 aa11.64□□□□□ -0.55
LSMEM1-202ENST00000439068 PASKQ96RG2 1323 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 AFDNP55196 1824 aaKnown RBP11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 LGR5O75473 907 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 FSHRP23945 695 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 EPHX2P34913 555 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 FKBP4Q02790 459 aaKnown RBP eCLIP11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 USP4Q13107 963 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 JDP2Q8WYK2 163 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 CDK15Q96Q40 435 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 MRC1P22897 1456 aa11.63□□□□□ -0.55
LSMEM1-202ENST00000439068 ADAMTS7Q9UKP4 1686 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 ATP1A2P50993 1020 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 LBX1P52954 281 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 CNTROBQ8N137 903 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 TPCN2Q8NHX9 752 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 RTF1Q92541 710 aaKnown RBP11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 MRGPRX2Q96LB1 330 aa11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 ABT1Q9ULW3 272 aaKnown RBP11.62□□□□□ -0.55
LSMEM1-202ENST00000439068 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
LSMEM1-202ENST00000439068 SNRPA1P09661 255 aaKnown RBP11.61□□□□□ -0.55
LSMEM1-202ENST00000439068 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
LSMEM1-202ENST00000439068 ZNF277Q9NRM2 450 aaPredicted RBP11.61□□□□□ -0.55
LSMEM1-202ENST00000439068 NIP7Q9Y221 180 aaKnown RBP eCLIP11.61□□□□□ -0.55
LSMEM1-202ENST00000439068 STAU1O95793 577 aaKnown RBP11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 ECE1P42892 770 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 EIF6P56537 245 aaKnown RBP11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 GPC2Q8N158 579 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 TMX4Q9H1E5 349 aaPredicted RBP11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 CYLDQ9NQC7 956 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 USP16Q9Y5T5 823 aa11.6□□□□□ -0.55
LSMEM1-202ENST00000439068 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 FZD9O00144 591 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 WNT7AO00755 349 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 IARSP41252 1262 aaKnown RBP11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 SIX5Q8N196 739 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 NYXQ9GZU5 481 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms