RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 MYO5AQ9Y4I1 1855 aaKnown RBP16.39■□□□□ 0.21
LINC00399-201ENST00000439008 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00399-201ENST00000439008 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
LINC00399-201ENST00000439008 MOB2Q70IA6 237 aa16.38■□□□□ 0.21
LINC00399-201ENST00000439008 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
LINC00399-201ENST00000439008 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
LINC00399-201ENST00000439008 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
LINC00399-201ENST00000439008 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
LINC00399-201ENST00000439008 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
LINC00399-201ENST00000439008 SEMA3EO15041 775 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
LINC00399-201ENST00000439008 MCAMP43121 646 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 DEFB115Q30KQ5 88 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 APOBEC3HQ6NTF7 200 aaKnown RBP16.37■□□□□ 0.21
LINC00399-201ENST00000439008 CDAN1Q8IWY9 1227 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 CCDC8Q9H0W5 538 aaPredicted RBP16.37■□□□□ 0.21
LINC00399-201ENST00000439008 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 GNL3LQ9NVN8 582 aaKnown RBP16.37■□□□□ 0.21
LINC00399-201ENST00000439008 ZNF70Q9UC06 446 aaPredicted RBP16.37■□□□□ 0.21
LINC00399-201ENST00000439008 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 SSC5DA1L4H1 1573 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 SALL1Q9NSC2 1324 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 MYH2Q9UKX2 1941 aa16.37■□□□□ 0.21
LINC00399-201ENST00000439008 HDLBPQ00341 1268 aaKnown RBP16.36■□□□□ 0.21
LINC00399-201ENST00000439008 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
LINC00399-201ENST00000439008 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
LINC00399-201ENST00000439008 DEFB129Q9H1M3 183 aa16.36■□□□□ 0.21
LINC00399-201ENST00000439008 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
LINC00399-201ENST00000439008 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
LINC00399-201ENST00000439008 PCDHB15Q9Y5E8 787 aa16.36■□□□□ 0.21
LINC00399-201ENST00000439008 APBB1O00213 710 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 CACNB3P54284 484 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 ZDHHC15Q96MV8 337 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 ZIC5Q96T25 663 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 MRIQ9BWK5 157 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 VEZTQ9HBM0 779 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 SNRKQ9NRH2 765 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
LINC00399-201ENST00000439008 PDS5AQ29RF7 1337 aaKnown RBP16.35■□□□□ 0.21
LINC00399-201ENST00000439008 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
LINC00399-201ENST00000439008 HHIPL2Q6UWX4 724 aa16.34■□□□□ 0.21
LINC00399-201ENST00000439008 APOBEC3FQ8IUX4 373 aaKnown RBP16.34■□□□□ 0.21
LINC00399-201ENST00000439008 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
LINC00399-201ENST00000439008 TEKT1Q969V4 418 aa16.34■□□□□ 0.21
LINC00399-201ENST00000439008 CAPNS2Q96L46 248 aa16.34■□□□□ 0.21
LINC00399-201ENST00000439008 WDR33Q9C0J8 1336 aaKnown RBP16.34■□□□□ 0.21
LINC00399-201ENST00000439008 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
LINC00399-201ENST00000439008 PAPPA2Q9BXP8 1791 aa16.33■□□□□ 0.21
LINC00399-201ENST00000439008 AOC2O75106 756 aa16.33■□□□□ 0.2
LINC00399-201ENST00000439008 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.2
LINC00399-201ENST00000439008 HUNKP57058 714 aa16.33■□□□□ 0.2
LINC00399-201ENST00000439008 RASA3Q14644 834 aa16.33■□□□□ 0.2
LINC00399-201ENST00000439008 NBPF12Q5TAG4 269 aaPredicted RBP16.33■□□□□ 0.2
LINC00399-201ENST00000439008 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
LINC00399-201ENST00000439008 NDUFB9Q9Y6M9 179 aa16.33■□□□□ 0.2
LINC00399-201ENST00000439008 TCP10L2B9ZVM9 353 aa16.32■□□□□ 0.2
LINC00399-201ENST00000439008 UBE2Q2LH0YL09 131 aa16.32■□□□□ 0.2
LINC00399-201ENST00000439008 HMMRO75330 724 aa16.32■□□□□ 0.2
LINC00399-201ENST00000439008 AACSQ86V21 672 aa16.32■□□□□ 0.2
LINC00399-201ENST00000439008 C2orf69Q8N8R5 385 aa16.32■□□□□ 0.2
LINC00399-201ENST00000439008 CHMP4BQ9H444 224 aaKnown RBP16.32■□□□□ 0.2
LINC00399-201ENST00000439008 ABCF2Q9UG63 623 aa16.32■□□□□ 0.2
LINC00399-201ENST00000439008 FAM155AB1AL88 458 aaPredicted RBP16.31■□□□□ 0.2
LINC00399-201ENST00000439008 CYP2E1P05181 493 aaPredicted RBP16.31■□□□□ 0.2
LINC00399-201ENST00000439008 ZAP70P43403 619 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 MECOMQ03112 1051 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 GRM1Q13255 1194 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 PRKG1Q13976 671 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 TTC39AQ5SRH9 613 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 HHIPL1Q96JK4 782 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 TMEM39BQ9GZU3 492 aa16.31■□□□□ 0.2
LINC00399-201ENST00000439008 GAKO14976 1311 aa16.3■□□□□ 0.2
LINC00399-201ENST00000439008 MAST3O60307 1309 aa16.3■□□□□ 0.2
LINC00399-201ENST00000439008 MYO1BO43795 1136 aa16.3■□□□□ 0.2
LINC00399-201ENST00000439008 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
LINC00399-201ENST00000439008 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
LINC00399-201ENST00000439008 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
LINC00399-201ENST00000439008 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
LINC00399-201ENST00000439008 ZNF512BQ96KM6 892 aaPredicted RBP16.3■□□□□ 0.2
LINC00399-201ENST00000439008 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
LINC00399-201ENST00000439008 NFIAQ12857 509 aa16.29■□□□□ 0.2
LINC00399-201ENST00000439008 HSP90AB4PQ58FF6 505 aa16.29■□□□□ 0.2
LINC00399-201ENST00000439008 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
LINC00399-201ENST00000439008 NSUN4Q96CB9 384 aaKnown RBP16.29■□□□□ 0.2
LINC00399-201ENST00000439008 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
LINC00399-201ENST00000439008 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
LINC00399-201ENST00000439008 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
LINC00399-201ENST00000439008 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
LINC00399-201ENST00000439008 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
LINC00399-201ENST00000439008 RGMBQ6NW40 437 aa16.28■□□□□ 0.2
LINC00399-201ENST00000439008 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
LINC00399-201ENST00000439008 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
LINC00399-201ENST00000439008 FAM163AQ96GL9 167 aaPredicted RBP16.28■□□□□ 0.2
LINC00399-201ENST00000439008 ANTXR1Q9H6X2 564 aa16.28■□□□□ 0.2
LINC00399-201ENST00000439008 DCTPP1Q9H773 170 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms