RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SMC1BQ8NDV3 1235 aa19.75■□□□□ 0.75
SNRPB-202ENST00000438552 SUGT1Q9Y2Z0 365 aa19.75■□□□□ 0.75
SNRPB-202ENST00000438552 MAST3O60307 1309 aa19.75■□□□□ 0.75
SNRPB-202ENST00000438552 NBPF9Q3BBW0 867 aa19.74■□□□□ 0.75
SNRPB-202ENST00000438552 TSHZ3Q63HK5 1081 aa19.74■□□□□ 0.75
SNRPB-202ENST00000438552 B4GALNT3Q6L9W6 998 aa19.74■□□□□ 0.75
SNRPB-202ENST00000438552 ZGPATQ8N5A5 531 aaKnown RBP19.74■□□□□ 0.75
SNRPB-202ENST00000438552 OTUD7AQ8TE49 926 aaPredicted RBP19.74■□□□□ 0.75
SNRPB-202ENST00000438552 GGA3Q9NZ52 723 aa19.74■□□□□ 0.75
SNRPB-202ENST00000438552 ZBTB47Q9UFB7 747 aaPredicted RBP19.74■□□□□ 0.75
SNRPB-202ENST00000438552 MYH7P12883 1935 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 WNT10BO00744 389 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 CYP2E1P05181 493 aaPredicted RBP19.73■□□□□ 0.75
SNRPB-202ENST00000438552 CRKP46108 304 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 MMP14P50281 582 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 RBM5P52756 815 aaKnown RBP eCLIP19.73■□□□□ 0.75
SNRPB-202ENST00000438552 DLGAP5Q15398 846 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 SERPINA10Q9UK55 444 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 AOX1Q06278 1338 aa19.73■□□□□ 0.75
SNRPB-202ENST00000438552 SPDYE2BA6NHP3 402 aa19.72■□□□□ 0.75
SNRPB-202ENST00000438552 SPDYE6P0CI01 402 aa19.72■□□□□ 0.75
SNRPB-202ENST00000438552 DIXDC1Q155Q3 683 aa19.72■□□□□ 0.75
SNRPB-202ENST00000438552 DZIP1Q86YF9 867 aaKnown RBP19.72■□□□□ 0.75
SNRPB-202ENST00000438552 TEKT1Q969V4 418 aa19.72■□□□□ 0.75
SNRPB-202ENST00000438552 ZBED3Q96IU2 234 aaPredicted RBP19.72■□□□□ 0.75
SNRPB-202ENST00000438552 TRPM7Q96QT4 1865 aa19.72■□□□□ 0.75
SNRPB-202ENST00000438552 LNPKQ9C0E8 428 aa19.72■□□□□ 0.75
SNRPB-202ENST00000438552 PIH1D3Q9NQM4 214 aaKnown RBP19.72■□□□□ 0.75
SNRPB-202ENST00000438552 FSTL1Q12841 308 aa19.71■□□□□ 0.75
SNRPB-202ENST00000438552 ANGEL2Q5VTE6 544 aaKnown RBP19.71■□□□□ 0.75
SNRPB-202ENST00000438552 SPTY2D1Q68D10 685 aaPredicted RBP19.71■□□□□ 0.75
SNRPB-202ENST00000438552 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
SNRPB-202ENST00000438552 MTMR14Q8NCE2 650 aa19.71■□□□□ 0.75
SNRPB-202ENST00000438552 ZC3H15Q8WU90 426 aaKnown RBP19.71■□□□□ 0.75
SNRPB-202ENST00000438552 GPATCH3Q96I76 525 aa19.71■□□□□ 0.75
SNRPB-202ENST00000438552 DNAJC2Q99543 621 aaKnown RBP19.71■□□□□ 0.75
SNRPB-202ENST00000438552 ECHDC1Q9NTX5 307 aa19.71■□□□□ 0.75
SNRPB-202ENST00000438552 PGAP2Q9UHJ9 254 aa19.71■□□□□ 0.75
SNRPB-202ENST00000438552 ATP5JP18859 108 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 MECOMQ03112 1051 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 ZNF384Q8TF68 577 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.7■□□□□ 0.74
SNRPB-202ENST00000438552 PRMT6Q96LA8 375 aaPredicted RBP19.7■□□□□ 0.74
SNRPB-202ENST00000438552 BOLA2Q9H3K6 86 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 RAI14Q9P0K7 980 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 SCAF8Q9UPN6 1271 aaKnown RBP19.7■□□□□ 0.74
SNRPB-202ENST00000438552 SALL3Q9BXA9 1300 aa19.7■□□□□ 0.74
SNRPB-202ENST00000438552 CLRN2A0PK11 232 aa19.69■□□□□ 0.74
SNRPB-202ENST00000438552 HDLBPQ00341 1268 aaKnown RBP19.69■□□□□ 0.74
SNRPB-202ENST00000438552 NUCB1Q02818 461 aa19.69■□□□□ 0.74
SNRPB-202ENST00000438552 CHD1LQ86WJ1 897 aa19.69■□□□□ 0.74
SNRPB-202ENST00000438552 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
SNRPB-202ENST00000438552 EDC3Q96F86 508 aaKnown RBP19.69■□□□□ 0.74
SNRPB-202ENST00000438552 GLIS2Q9BZE0 524 aaPredicted RBP19.69■□□□□ 0.74
SNRPB-202ENST00000438552 DAGLAQ9Y4D2 1042 aa19.69■□□□□ 0.74
SNRPB-202ENST00000438552 ADM5C9JUS6 153 aa19.68■□□□□ 0.74
SNRPB-202ENST00000438552 GOLIM4O00461 696 aa19.68■□□□□ 0.74
SNRPB-202ENST00000438552 MX1P20591 662 aa19.68■□□□□ 0.74
SNRPB-202ENST00000438552 DCPSQ96C86 337 aaKnown RBP19.68■□□□□ 0.74
SNRPB-202ENST00000438552 ZDHHC15Q96MV8 337 aa19.68■□□□□ 0.74
SNRPB-202ENST00000438552 TRAF5O00463 557 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 FMR1Q06787 632 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■□□□□ 11.3
SNRPB-202ENST00000438552 HHIPL2Q6UWX4 724 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 KRT26Q7Z3Y9 468 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 NSUN4Q96CB9 384 aaKnown RBP19.67■□□□□ 0.74
SNRPB-202ENST00000438552 HAUS7Q99871 368 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 TDRD3Q9H7E2 651 aaKnown RBP19.67■□□□□ 0.74
SNRPB-202ENST00000438552 MROH7-TTC4A0A0A0MT08 1334 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 PITPNM2Q9BZ72 1349 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
SNRPB-202ENST00000438552 MYO1BO43795 1136 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 IDH1O75874 414 aaKnown RBP19.66■□□□□ 0.74
SNRPB-202ENST00000438552 ITGBL1O95965 494 aaPredicted RBP19.66■□□□□ 0.74
SNRPB-202ENST00000438552 APOBEC3HQ6NTF7 200 aaKnown RBP19.66■□□□□ 0.74
SNRPB-202ENST00000438552 DLK2Q6UY11 383 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 USP48Q86UV5 1035 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 PI4K2BQ8TCG2 481 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 MRIQ9BWK5 157 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 VEZTQ9HBM0 779 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 PAG1Q9NWQ8 432 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 GAKO14976 1311 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 PASKQ96RG2 1323 aa19.66■□□□□ 0.74
SNRPB-202ENST00000438552 SPDYE2Q495Y8 402 aa19.65■□□□□ 0.74
SNRPB-202ENST00000438552 CDC37L1Q7L3B6 337 aa19.65■□□□□ 0.74
SNRPB-202ENST00000438552 APOBEC3FQ8IUX4 373 aaKnown RBP19.65■□□□□ 0.74
SNRPB-202ENST00000438552 SULF1Q8IWU6 871 aa19.65■□□□□ 0.74
SNRPB-202ENST00000438552 ZNF70Q9UC06 446 aaPredicted RBP19.65■□□□□ 0.74
SNRPB-202ENST00000438552 FOCADQ5VW36 1801 aa19.65■□□□□ 0.74
SNRPB-202ENST00000438552 AK9Q5TCS8 1911 aa19.64■□□□□ 0.74
SNRPB-202ENST00000438552 CACNB3P54284 484 aa19.64■□□□□ 0.73
SNRPB-202ENST00000438552 GSTO1P78417 241 aa19.64■□□□□ 0.73
SNRPB-202ENST00000438552 TTF1Q15361 905 aaPredicted RBP19.64■□□□□ 0.73
SNRPB-202ENST00000438552 NAA16Q6N069 864 aaPredicted RBP19.64■□□□□ 0.73
SNRPB-202ENST00000438552 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
SNRPB-202ENST00000438552 ERC2O15083 957 aa19.63■□□□□ 0.73
SNRPB-202ENST00000438552 MAP4K4O95819 1239 aaPredicted RBP19.63■□□□□ 0.73
SNRPB-202ENST00000438552 BTDP43251 543 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms