RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 TDRD7Q8NHU6 1098 aaKnown RBP11.79□□□□□ -0.52
CUBN-204ENST00000438254 GPR101Q96P66 508 aaPredicted RBP11.79□□□□□ -0.52
CUBN-204ENST00000438254 ANTXR1Q9H6X2 564 aa11.79□□□□□ -0.52
CUBN-204ENST00000438254 PAG1Q9NWQ8 432 aa11.79□□□□□ -0.52
CUBN-204ENST00000438254 C21orf2O43822 256 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 IL1R1P14778 569 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 SPATA5Q8NB90 893 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 RILPL2Q969X0 211 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 PSMD1Q99460 953 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 ZNF646O15015 1829 aaPredicted RBP11.78□□□□□ -0.52
CUBN-204ENST00000438254 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 FER1L6Q2WGJ9 1857 aa11.78□□□□□ -0.52
CUBN-204ENST00000438254 GOLIM4O00461 696 aa11.77□□□□□ -0.53
CUBN-204ENST00000438254 CCDC93Q567U6 631 aa11.77□□□□□ -0.53
CUBN-204ENST00000438254 MICALL2Q8IY33 904 aa11.77□□□□□ -0.53
CUBN-204ENST00000438254 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
CUBN-204ENST00000438254 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
CUBN-204ENST00000438254 IL25Q9H293 177 aa11.77□□□□□ -0.53
CUBN-204ENST00000438254 PIH1D3Q9NQM4 214 aaKnown RBP11.77□□□□□ -0.53
CUBN-204ENST00000438254 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
CUBN-204ENST00000438254 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
CUBN-204ENST00000438254 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
CUBN-204ENST00000438254 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 ZNF804AQ7Z570 1209 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 COA1Q9GZY4 146 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 GNL3LQ9NVN8 582 aaKnown RBP11.76□□□□□ -0.53
CUBN-204ENST00000438254 DENND2AQ9ULE3 1009 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 SALL1Q9NSC2 1324 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 CHD4Q14839 1912 aa11.76□□□□□ -0.53
CUBN-204ENST00000438254 COL4A5P29400 1685 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 CHGBP05060 677 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
CUBN-204ENST00000438254 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
CUBN-204ENST00000438254 EYA3Q99504 573 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 ESYT1Q9BSJ8 1104 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
CUBN-204ENST00000438254 VPS33BQ9H267 617 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
CUBN-204ENST00000438254 IQSEC3Q9UPP2 1182 aaPredicted RBP11.75□□□□□ -0.53
CUBN-204ENST00000438254 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 LTBP3Q9NS15 1303 aa11.75□□□□□ -0.53
CUBN-204ENST00000438254 MYH7P12883 1935 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 TCRBV5S4A2TA0A5A2 114 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 NFKBIEO00221 500 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 HIP1O00291 1037 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 SGSM2O43147 1006 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 IGSF3O75054 1194 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 WASHC4Q2M389 1173 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 SUPT20HQ8NEM7 779 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CUBN-204ENST00000438254 SYT17Q9BSW7 474 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 FSD1Q9BTV5 496 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 ZC3H12CQ9C0D7 883 aaKnown RBP11.74□□□□□ -0.53
CUBN-204ENST00000438254 SCN9AQ15858 1988 aa11.74□□□□□ -0.53
CUBN-204ENST00000438254 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 ADD2P35612 726 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
CUBN-204ENST00000438254 PSME4Q14997 1843 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 RAD50Q92878 1312 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
CUBN-204ENST00000438254 RNF113AO15541 343 aaKnown RBP11.72□□□□□ -0.53
CUBN-204ENST00000438254 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
CUBN-204ENST00000438254 UBE3CQ15386 1083 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 AOC3Q16853 763 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
CUBN-204ENST00000438254 YDJCA8MPS7 323 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.53
CUBN-204ENST00000438254 PDE6AP16499 860 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 PRELPP51888 382 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 GRIK5Q16478 980 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
CUBN-204ENST00000438254 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
CUBN-204ENST00000438254 APPBP2Q92624 585 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 HELLSQ9NRZ9 838 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 DIAPH3Q9NSV4 1193 aa11.71□□□□□ -0.53
CUBN-204ENST00000438254 MAST3O60307 1309 aa11.7□□□□□ -0.54
CUBN-204ENST00000438254 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
CUBN-204ENST00000438254 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
CUBN-204ENST00000438254 ECE2O60344 883 aa11.7□□□□□ -0.54
CUBN-204ENST00000438254 PRDX5P30044 214 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms