RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 CAVIN4Q5BKX8 364 aa25.37■■□□□ 1.65
COL6A2-206ENST00000436769 VPS37DQ86XT2 251 aa25.37■■□□□ 1.65
COL6A2-206ENST00000436769 TEPSINQ96N21 525 aa25.37■■□□□ 1.65
COL6A2-206ENST00000436769 MANSC4A6NHS7 340 aaPredicted RBP25.36■■□□□ 1.65
COL6A2-206ENST00000436769 CDAN1Q8IWY9 1227 aa25.36■■□□□ 1.65
COL6A2-206ENST00000436769 IREB2P48200 963 aaKnown RBP25.35■■□□□ 1.65
COL6A2-206ENST00000436769 HDLBPQ00341 1268 aaKnown RBP25.35■■□□□ 1.65
COL6A2-206ENST00000436769 CHAF1AQ13111 956 aaPredicted RBP25.35■■□□□ 1.65
COL6A2-206ENST00000436769 TNFAIP1Q13829 316 aa25.35■■□□□ 1.65
COL6A2-206ENST00000436769 IFNL1Q8IU54 200 aa25.35■■□□□ 1.65
COL6A2-206ENST00000436769 TBC1D22AQ8WUA7 517 aa25.35■■□□□ 1.65
COL6A2-206ENST00000436769 SMC4Q9NTJ3 1288 aa25.35■■□□□ 1.65
COL6A2-206ENST00000436769 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.35■■□□□ 1.65
COL6A2-206ENST00000436769 PDE4DIPQ5VU43 2346 aa25.35■■□□□ 1.65
COL6A2-206ENST00000436769 KIF16BQ96L93 1317 aa25.35■■□□□ 1.65
COL6A2-206ENST00000436769 ALDH1A1P00352 501 aa25.34■■□□□ 1.65
COL6A2-206ENST00000436769 GJA5P36382 358 aa25.34■■□□□ 1.65
COL6A2-206ENST00000436769 PKN2Q16513 984 aaKnown RBP25.34■■□□□ 1.65
COL6A2-206ENST00000436769 ANKRD13AQ8IZ07 590 aa25.34■■□□□ 1.65
COL6A2-206ENST00000436769 HPS5Q9UPZ3 1129 aa25.34■■□□□ 1.65
COL6A2-206ENST00000436769 OTOFQ9HC10 1997 aa25.34■■□□□ 1.65
COL6A2-206ENST00000436769 EYA2O00167 538 aa25.33■■□□□ 1.65
COL6A2-206ENST00000436769 IGF2BP3O00425 579 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL6A2-206ENST00000436769 PUM3Q15397 648 aaKnown RBP25.33■■□□□ 1.65
COL6A2-206ENST00000436769 MRIQ9BWK5 157 aa25.33■■□□□ 1.65
COL6A2-206ENST00000436769 TCP10L2B9ZVM9 353 aa25.32■■□□□ 1.64
COL6A2-206ENST00000436769 FKTNO75072 461 aa25.32■■□□□ 1.64
COL6A2-206ENST00000436769 ATG9AQ7Z3C6 839 aa25.32■■□□□ 1.64
COL6A2-206ENST00000436769 TMEM39BQ9GZU3 492 aa25.32■■□□□ 1.64
COL6A2-206ENST00000436769 FRAT2O75474 233 aaPredicted RBP25.31■■□□□ 1.64
COL6A2-206ENST00000436769 CT47B1P0C2W7 299 aaPredicted RBP25.31■■□□□ 1.64
COL6A2-206ENST00000436769 SOX10P56693 466 aa25.31■■□□□ 1.64
COL6A2-206ENST00000436769 NOB1Q9ULX3 412 aaKnown RBP25.31■■□□□ 1.64
COL6A2-206ENST00000436769 IFIT1P09914 478 aaKnown RBP25.3■■□□□ 1.64
COL6A2-206ENST00000436769 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.3■■□□□ 1.64
COL6A2-206ENST00000436769 TESPA1A2RU30 521 aaPredicted RBP25.29■■□□□ 1.64
COL6A2-206ENST00000436769 APOBEC3HQ6NTF7 200 aaKnown RBP25.29■■□□□ 1.64
COL6A2-206ENST00000436769 LPIN2Q92539 896 aa25.29■■□□□ 1.64
COL6A2-206ENST00000436769 TEKT1Q969V4 418 aa25.29■■□□□ 1.64
COL6A2-206ENST00000436769 ZDHHC15Q96MV8 337 aa25.29■■□□□ 1.64
COL6A2-206ENST00000436769 PTPN18Q99952 460 aa25.29■■□□□ 1.64
COL6A2-206ENST00000436769 SUGT1Q9Y2Z0 365 aa25.29■■□□□ 1.64
COL6A2-206ENST00000436769 MYH13Q9UKX3 1938 aa25.28■■□□□ 1.64
COL6A2-206ENST00000436769 TNNI2P48788 182 aa25.28■■□□□ 1.64
COL6A2-206ENST00000436769 MKI67P46013 3256 aaKnown RBP25.27■■□□□ 1.64
COL6A2-206ENST00000436769 UBTFL1P0CB47 393 aaPredicted RBP25.27■■□□□ 1.64
COL6A2-206ENST00000436769 CACNB3P54284 484 aa25.27■■□□□ 1.64
COL6A2-206ENST00000436769 FBXO46Q6PJ61 603 aaPredicted RBP25.27■■□□□ 1.64
COL6A2-206ENST00000436769 ELP3Q9H9T3 547 aa25.27■■□□□ 1.64
COL6A2-206ENST00000436769 FBXO3Q9UK99 471 aa25.27■■□□□ 1.64
COL6A2-206ENST00000436769 BRCA2P51587 3418 aa25.27■■□□□ 1.64
COL6A2-206ENST00000436769 CCER2I3L3R5 266 aa25.26■■□□□ 1.63
COL6A2-206ENST00000436769 SLC5A1P13866 664 aa25.26■■□□□ 1.63
COL6A2-206ENST00000436769 MAP3K9P80192 1104 aa25.26■■□□□ 1.63
COL6A2-206ENST00000436769 HHIPL2Q6UWX4 724 aa25.26■■□□□ 1.63
COL6A2-206ENST00000436769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.26■■□□□ 1.63
COL6A2-206ENST00000436769 OPTNQ96CV9 577 aa25.26■■□□□ 1.63
COL6A2-206ENST00000436769 MS4A4AQ96JQ5 239 aa25.26■■□□□ 1.63
COL6A2-206ENST00000436769 CIAO1O76071 339 aa25.25■■□□□ 1.63
COL6A2-206ENST00000436769 FKBP1CQ5VVH2 108 aa25.25■■□□□ 1.63
COL6A2-206ENST00000436769 CNKSR2Q8WXI2 1034 aa25.25■■□□□ 1.63
COL6A2-206ENST00000436769 API5Q9BZZ5 524 aaKnown RBP25.25■■□□□ 1.63
COL6A2-206ENST00000436769 RARSP54136 660 aaKnown RBP25.24■■□□□ 1.63
COL6A2-206ENST00000436769 VGLL4Q14135 290 aa25.24■■□□□ 1.63
COL6A2-206ENST00000436769 FAM83AQ86UY5 434 aa25.24■■□□□ 1.63
COL6A2-206ENST00000436769 WDR66Q8TBY9 1149 aa25.24■■□□□ 1.63
COL6A2-206ENST00000436769 SIL1Q9H173 461 aa25.24■■□□□ 1.63
COL6A2-206ENST00000436769 MAST3O60307 1309 aa25.23■■□□□ 1.63
COL6A2-206ENST00000436769 CRHR2Q13324 411 aa25.23■■□□□ 1.63
COL6A2-206ENST00000436769 LRRFIP2Q9Y608 721 aaKnown RBP25.23■■□□□ 1.63
COL6A2-206ENST00000436769 OTUD7BQ6GQQ9 843 aa25.22■■□□□ 1.63
COL6A2-206ENST00000436769 ATP2B3Q16720 1220 aa25.21■■□□□ 1.63
COL6A2-206ENST00000436769 BRI3BPQ8WY22 251 aa25.21■■□□□ 1.63
COL6A2-206ENST00000436769 MEIS3Q99687 375 aa25.21■■□□□ 1.63
COL6A2-206ENST00000436769 CEP126Q9P2H0 1117 aa25.21■■□□□ 1.63
COL6A2-206ENST00000436769 PA2G4Q9UQ80 394 aaKnown RBP25.21■■□□□ 1.63
COL6A2-206ENST00000436769 OTOP1Q7RTM1 612 aa25.2■■□□□ 1.62
COL6A2-206ENST00000436769 COPRSQ9NQ92 184 aa25.2■■□□□ 1.62
COL6A2-206ENST00000436769 TMOD2Q9NZR1 351 aa25.2■■□□□ 1.62
COL6A2-206ENST00000436769 IL15P40933 162 aaPredicted RBP25.19■■□□□ 1.62
COL6A2-206ENST00000436769 INTS3Q68E01 1043 aaKnown RBP25.19■■□□□ 1.62
COL6A2-206ENST00000436769 ARHGAP45Q92619 1136 aa25.19■■□□□ 1.62
COL6A2-206ENST00000436769 TRIM17Q9Y577 477 aa25.19■■□□□ 1.62
COL6A2-206ENST00000436769 CSADQ9Y600 493 aa25.19■■□□□ 1.62
COL6A2-206ENST00000436769 ZBTB22O15209 634 aa25.18■■□□□ 1.62
COL6A2-206ENST00000436769 PRDX5P30044 214 aa25.18■■□□□ 1.62
COL6A2-206ENST00000436769 CAP1Q01518 475 aa25.18■■□□□ 1.62
COL6A2-206ENST00000436769 HDAC5Q9UQL6 1122 aa25.18■■□□□ 1.62
COL6A2-206ENST00000436769 DAGLAQ9Y4D2 1042 aa25.18■■□□□ 1.62
COL6A2-206ENST00000436769 SNCAIPQ9Y6H5 919 aa25.18■■□□□ 1.62
COL6A2-206ENST00000436769 RPAP1Q9BWH6 1393 aaPredicted RBP25.18■■□□□ 1.62
COL6A2-206ENST00000436769 SPDYE5A6NIY4 337 aa25.17■■□□□ 1.62
COL6A2-206ENST00000436769 GTF2A2P52657 109 aa25.17■■□□□ 1.62
COL6A2-206ENST00000436769 DIXDC1Q155Q3 683 aa25.17■■□□□ 1.62
COL6A2-206ENST00000436769 ZKSCAN4Q969J2 545 aaPredicted RBP25.17■■□□□ 1.62
COL6A2-206ENST00000436769 OTUD5Q96G74 571 aa25.17■■□□□ 1.62
COL6A2-206ENST00000436769 SALL1Q9NSC2 1324 aa25.16■■□□□ 1.62
COL6A2-206ENST00000436769 CCL15-CCL14A0A0B4J2E2 113 aa25.16■■□□□ 1.62
COL6A2-206ENST00000436769 PHKA1P46020 1223 aa25.16■■□□□ 1.62
COL6A2-206ENST00000436769 CCL15Q16663 113 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms