RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 GSE1Q14687 1217 aa12.91□□□□□ -0.34
LINC01516-201ENST00000436140 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
LINC01516-201ENST00000436140 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 GJB4Q9NTQ9 266 aa12.91□□□□□ -0.34
LINC01516-201ENST00000436140 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.34
LINC01516-201ENST00000436140 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
LINC01516-201ENST00000436140 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
LINC01516-201ENST00000436140 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
LINC01516-201ENST00000436140 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
LINC01516-201ENST00000436140 PRC1O43663 620 aa12.9□□□□□ -0.34
LINC01516-201ENST00000436140 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
LINC01516-201ENST00000436140 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
LINC01516-201ENST00000436140 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
LINC01516-201ENST00000436140 MECOMQ03112 1051 aa12.9□□□□□ -0.35
LINC01516-201ENST00000436140 TRDNQ13061 729 aa12.9□□□□□ -0.35
LINC01516-201ENST00000436140 CMTR1Q8N1G2 835 aaKnown RBP12.9□□□□□ -0.35
LINC01516-201ENST00000436140 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.35
LINC01516-201ENST00000436140 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.35
LINC01516-201ENST00000436140 POLLQ9UGP5 575 aa12.9□□□□□ -0.35
LINC01516-201ENST00000436140 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.35
LINC01516-201ENST00000436140 FIBPO43427 364 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 KRT32Q14532 448 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
LINC01516-201ENST00000436140 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 G3V3G9 751 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 ADRA2BP18089 450 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 SCRN1Q12765 414 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
LINC01516-201ENST00000436140 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 CTNNA3Q9UI47 895 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
LINC01516-201ENST00000436140 STX6O43752 255 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 KCNB2Q92953 911 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
LINC01516-201ENST00000436140 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 KCNQ5Q9NR82 932 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 PLSCR1O15162 318 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 CYP2D6P10635 497 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 SF3B2Q13435 895 aaKnown RBP12.88□□□□□ -0.35
LINC01516-201ENST00000436140 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 MICU3Q86XE3 530 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 CNPY2Q9Y2B0 182 aa12.88□□□□□ -0.35
LINC01516-201ENST00000436140 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 GTF2IP78347 998 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 PIBF1Q8WXW3 757 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
LINC01516-201ENST00000436140 UBE2Q2LH0YL09 131 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
LINC01516-201ENST00000436140 GGA1Q9UJY5 639 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
LINC01516-201ENST00000436140 NEDD4P46934 1319 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 USP17L21D6R901 530 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
LINC01516-201ENST00000436140 DNM1Q05193 864 aaKnown RBP12.87□□□□□ -0.35
LINC01516-201ENST00000436140 CDC37L1Q7L3B6 337 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 DBNDD1Q9H9R9 158 aa12.87□□□□□ -0.35
LINC01516-201ENST00000436140 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
LINC01516-201ENST00000436140 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ANTXR2P58335 489 aa12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
LINC01516-201ENST00000436140 EPB41L2O43491 1005 aaKnown RBP12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
LINC01516-201ENST00000436140 BRD1O95696 1058 aa12.86□□□□□ -0.35
LINC01516-201ENST00000436140 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ZNF512BQ96KM6 892 aaPredicted RBP12.86□□□□□ -0.35
LINC01516-201ENST00000436140 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
LINC01516-201ENST00000436140 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 SLURP2P0DP57 97 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 SCNN1DP51172 638 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
LINC01516-201ENST00000436140 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 XDHP47989 1333 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 H3BQV1 296 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
LINC01516-201ENST00000436140 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
LINC01516-201ENST00000436140 MCM5P33992 734 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 ANKRD1Q15327 319 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 SLC15A2Q16348 729 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms