RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 NME2P22392 152 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 CANXP27824 592 aaKnown RBP6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 IKBKEQ14164 716 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 PERM1Q5SV97 790 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 SCARA3Q6AZY7 606 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 PSAPL1Q6NUJ1 521 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 KANK3Q6NY19 840 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 AGMOQ6ZNB7 445 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 ZNF296Q8WUU4 475 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 MDFIQ99750 246 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
HMGB1P45-201ENST00000435986 GDF11O95390 407 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 BPNT1O95861 308 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 CELA3AP09093 270 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 AP3B2Q13367 1082 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 CAMK2GQ13555 558 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 PCNX4Q63HM2 1172 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 GDF6Q6KF10 455 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 DCAF11Q8TEB1 546 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 HHIPQ96QV1 700 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 CBX8Q9HC52 389 aa6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 R3HCC1Q9Y3T6 440 aaKnown RBP6.85□□□□□ -1.31
HMGB1P45-201ENST00000435986 ENC1O14682 589 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 B3GALT4O96024 378 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 PF4P02776 101 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 SNRPNP63162 240 aaKnown RBP6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 APOBRQ0VD83 1088 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 HP1BP3Q5SSJ5 553 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 CKAP2LQ8IYA6 745 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 GOLM1Q8NBJ4 401 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 WNT8BQ93098 351 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 NKD1Q969G9 470 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 SOX13Q9UN79 622 aa6.84□□□□□ -1.31
HMGB1P45-201ENST00000435986 H3BRJ5 948 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 CYP11A1P05108 521 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 CWF19L2Q2TBE0 894 aaKnown RBP6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 TMEM151AQ8N4L1 468 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 RHOVQ96L33 236 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 LPIN3Q9BQK8 851 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 TRIM56Q9BRZ2 755 aaKnown RBP6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 JPH1Q9HDC5 661 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 KCNQ5Q9NR82 932 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 ADAMTS1Q9UHI8 967 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 TLR6Q9Y2C9 796 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 PPME1Q9Y570 386 aa6.83□□□□□ -1.32
HMGB1P45-201ENST00000435986 F6X3S4 739 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 LILRB5O75023 590 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 ESRRAP11474 423 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 ARNTP27540 789 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 ZNF157P51786 506 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 FAM160A1Q05DH4 1040 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 IL22RA1Q8N6P7 574 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 DHX38Q92620 1227 aaKnown RBP6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 BTBD6Q96KE9 485 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 DNAJC2Q99543 621 aaKnown RBP6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 TRIM33Q9UPN9 1127 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 EFR3BQ9Y2G0 817 aa6.82□□□□□ -1.32
HMGB1P45-201ENST00000435986 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 U2SURPO15042 1029 aaKnown RBP6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 TFE3P19532 575 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 NASPP49321 788 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 DGKGP49619 791 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 ZNF165P49910 485 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 FAM196AQ6ZSG2 479 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 CHSY3Q70JA7 882 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 VN1R5Q7Z5H4 357 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 BEND7Q8N7W2 519 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 NUDT8Q8WV74 236 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 CRBNQ96SW2 442 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 CORO1BQ9BR76 489 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 OSGEPQ9NPF4 335 aa6.81□□□□□ -1.32
HMGB1P45-201ENST00000435986 GREM1O60565 184 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 ITGB2P05107 769 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 FGRP09769 529 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 IMPDH2P12268 514 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 MCM4P33991 863 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 GSTM4Q03013 218 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 RBL2Q08999 1139 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 MLECQ14165 292 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 MPP2Q14168 576 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 LINC00114Q6XXX2 140 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 DPH6Q7L8W6 267 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms